Factsheet for Bra018986.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62199	Canola	cytosol	99.7	99.7
Bra030364.1-P	Field mustard	plastid	54.27	81.65
Solyc03g119980.2.1	Tomato	cytosol	79.88	80.12
VIT_09s0002g05730.t01	Wine grape	cytosol	78.35	80.06
KRH19112	Soybean	cytosol	78.96	79.45
PGSC0003DMT400014303	Potato	cytosol	78.96	79.2
KRH02768	Soybean	cytosol	65.55	74.91
GSMUA_Achr5P24890_001	Banana	cytoskeleton, cytosol, peroxisome	67.99	64.83
Os02t0207900-01	Rice	plasma membrane	63.72	60.93
GSMUA_Achr7P08420_001	Banana	cytosol	60.67	56.37
Bra041073.1-P	Field mustard	cytosol	39.33	40.19
Bra007148.1-P	Field mustard	cytosol	29.57	33.45
Bra017076.1-P	Field mustard	cytosol	32.32	33.44
Bra000132.1-P	Field mustard	mitochondrion	31.1	33.33
Bra017077.1-P	Field mustard	cytosol	29.57	31.19
Bra014388.1-P	Field mustard	cytosol	27.74	30.03
Bra003685.1-P	Field mustard	cytosol	17.07	29.47
Bra021437.1-P	Field mustard	cytosol	27.44	29.32
Bra008644.1-P	Field mustard	cytosol	29.27	29.0
Bra002224.1-P	Field mustard	cytosol	29.27	28.66
Bra020032.1-P	Field mustard	cytosol	28.66	28.06
Bra008307.1-P	Field mustard	cytosol, plastid	31.4	26.96
Bra008947.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	27.13	22.82
Bra003843.1-P	Field mustard	golgi, vacuole	25.61	21.99
Bra015989.1-P	Field mustard	plastid	26.22	21.13
Bra016558.1-P	Field mustard	cytosol, nucleus, plastid	25.0	20.92
Bra023553.1-P	Field mustard	cytosol	29.27	17.33
Bra007707.1-P	Field mustard	cytosol	28.66	16.76
Bra000456.1-P	Field mustard	nucleus	32.01	12.5

Protein Annotations

EnsemblPlants:Bra018986.1	EnsemblPlants:Bra018986.1-P	EnsemblPlantsGene:Bra018986	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF90	PFAM:PF12146	SUPFAM:SSF53474	UniParc:UPI000253E892
UniProt:M4DR43	MapMan:21.6.1.3	:	:	:	:

Description

AT1G52760 (E=8e-176) | esterase/lipase/thioesterase family protein

Coordinates

chrA06:-:886038..888051

Molecular Weight (calculated)

36869.9 Da

IEP (calculated)

6.107

GRAVY (calculated)

-0.359

Length

328 amino acids

Sequence
(BLAST)

001: MSSEAEKSNN SAPATPPPYF WGDMPEEEYY TSQGVRNTKS YFETPNGKLF TQSFLPLDGE IKGTVYMSHG YGSDTSWMFQ KICMSFSNWG YAVFAADLLG
101: HGRSDGIRCY LGDMEKVAAT SLCFFKHVRD SEPYKHLPAF LFGESMGGLA TLLMYFQSEP DTWTGLIFSA PLFVIPEDMK PSKTHLFAYG LLFGLADTWA
201: AMPDNKMVGK AIHDPEKLKI IAANPQRYTG KPRVGTMREL LRKTLYVQEN FGRVTAPFLT VHGTADGVTC PSSSKLLYEK ASSDDKTLKL YDGMYHSLIQ
301: GEPDENVAIV LKDMREWIDE RVERYGSK

Best Arabidopsis Sequence Match ( AT1G52760.1 )
(BLAST)

001: MPSEAESSAN SAPATPPPPP NFWGTMPEEE YYTSQGVRNS KSYFETPNGK LFTQSFLPLD GEIKGTVYMS HGYGSDTSWM FQKICMSFSS WGYAVFAADL
101: LGHGRSDGIR CYMGDMEKVA ATSLAFFKHV RCSDPYKDLP AFLFGESMGG LVTLLMYFQS EPETWTGLMF SAPLFVIPED MKPSKAHLFA YGLLFGLADT
201: WAAMPDNKMV GKAIKDPEKL KIIASNPQRY TGKPRVGTMR ELLRKTQYVQ ENFGKVTIPV FTAHGTADGV TCPTSSKLLY EKASSADKTL KIYEGMYHSL
301: IQGEPDENAE IVLKDMREWI DEKVKKYGSK TA

Arabidopsis Description

CSECaffeoylshikimate esterase [Source:UniProtKB/Swiss-Prot;Acc:Q9C942]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.