Factsheet for GSMUA_Achr5P24890_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, peroxisome
Any Predictor:	cytoskeleton, cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P08420_001	Banana	cytosol	77.62	75.64
VIT_09s0002g05730.t01	Wine grape	cytosol	67.15	71.96
Os02t0207900-01	Rice	plasma membrane	68.6	68.8
Solyc03g119980.2.1	Tomato	cytosol	65.12	68.5
Bra018986.1-P	Field mustard	cytosol	64.83	67.99
CDY72184	Canola	cytosol	64.83	67.99
CDY62199	Canola	cytosol	64.83	67.99
KRH19112	Soybean	cytosol	64.24	67.79
PGSC0003DMT400014303	Potato	cytosol	63.95	67.28
AT1G52760.1	Thale cress	cytosol	62.79	65.06
Bra030364.1-P	Field mustard	plastid	39.24	61.93
CDY62163	Canola	plastid	39.24	61.93
KRH02768	Soybean	cytosol	51.16	61.32
GSMUA_Achr9P24530_001	Banana	cytosol	31.4	40.45
GSMUA_Achr10P...	Banana	cytosol	30.52	33.76
GSMUA_Achr8P30050_001	Banana	cytosol	31.1	32.62
GSMUA_Achr6P34380_001	Banana	cytosol	31.69	31.59
GSMUA_Achr10P...	Banana	cytosol	26.74	31.51
GSMUA_Achr1P08950_001	Banana	peroxisome	29.94	31.12
GSMUA_Achr10P...	Banana	golgi	30.81	30.2
GSMUA_Achr8P02670_001	Banana	cytosol	30.23	30.14
GSMUA_Achr9P21380_001	Banana	cytosol	27.33	27.49
GSMUA_Achr6P34390_001	Banana	plastid	31.1	26.82
GSMUA_AchrUn_...	Banana	cytosol	25.58	25.66
GSMUA_Achr10P...	Banana	extracellular	18.31	24.9
GSMUA_Achr3P29490_001	Banana	plastid	27.03	24.6
GSMUA_Achr10P...	Banana	cytosol	21.22	24.41
GSMUA_Achr4P03690_001	Banana	mitochondrion	25.29	22.77
GSMUA_Achr8P20130_001	Banana	plastid	23.84	21.98
GSMUA_Achr7P13720_001	Banana	plastid	22.67	19.6
GSMUA_AchrUn_...	Banana	mitochondrion	24.13	19.21

Protein Annotations

EnsemblPlants:GSMUA_Achr5P24890_001	EnsemblPlants:GSMUA_Achr5T24890_001	EnsemblPlantsGene:GSMUA_Achr5G24890_001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
InterPro:Hydrolase_4	InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF90	PFAM:PF12146	PRINTS:PR00111
SEG:seg	SUPFAM:SSF53474	UniParc:UPI0002965875	UniProt:M0T1G4	MapMan:21.6.1.3	:

Description

Putative Monoglyceride lipase [Source:GMGC_GENE;Acc:GSMUA_Achr5G24890_001]

Coordinates

chr5:-:26093922..26094956

Molecular Weight (calculated)

38003.1 Da

IEP (calculated)

6.242

GRAVY (calculated)

-0.246

Length

344 amino acids

Sequence
(BLAST)

001: MGSDAPALPP PTTYFWGDVP GEDEYYASQG VRNRQSYFQS PHGRLFTQSF HPVDPATGAD LPVKALVFMT HGYGTDSGWL FQKIAIAYAT WGYAVHCADL
101: LGHGRSQGIR YYLGDMESVA AASLSFFLSV RRESPGMPAF LFGESMGGAA TLLMYLRSEP GTWTGLIFSA PLFVIPDDMK PSRLRLFLYG LLFGLADTWA
201: AMPDNKMVGK AIKDPDRLRV IASNPRRYTG QPRVGTMREL ARLCDFFQTK FGEVTAPFLT VHGTDDGVTS PEGSKTFYQR AASADKTLIL YEGMYHSLIQ
301: GEPEENSSRV LADMRAWIDE RVERYGGGEA FNGHSHGKVE EAVN

Best Arabidopsis Sequence Match ( AT1G52760.1 )
(BLAST)

001: MPSEAESSAN SAPATPPPPP NFWGTMPEEE YYTSQGVRNS KSYFETPNGK LFTQSFLPLD GEIKGTVYMS HGYGSDTSWM FQKICMSFSS WGYAVFAADL
101: LGHGRSDGIR CYMGDMEKVA ATSLAFFKHV RCSDPYKDLP AFLFGESMGG LVTLLMYFQS EPETWTGLMF SAPLFVIPED MKPSKAHLFA YGLLFGLADT
201: WAAMPDNKMV GKAIKDPEKL KIIASNPQRY TGKPRVGTMR ELLRKTQYVQ ENFGKVTIPV FTAHGTADGV TCPTSSKLLY EKASSADKTL KIYEGMYHSL
301: IQGEPDENAE IVLKDMREWI DEKVKKYGSK TA

Arabidopsis Description

CSECaffeoylshikimate esterase [Source:UniProtKB/Swiss-Prot;Acc:Q9C942]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.