Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P24890_001 | Banana | cytoskeleton, cytosol, peroxisome | 68.8 | 68.6 |
| VIT_09s0002g05730.t01 | Wine grape | cytosol | 60.64 | 64.8 |
| Bra018986.1-P | Field mustard | cytosol | 60.93 | 63.72 |
| CDY72184 | Canola | cytosol | 60.93 | 63.72 |
| CDY62199 | Canola | cytosol | 60.93 | 63.72 |
| KRH19112 | Soybean | cytosol | 59.18 | 62.27 |
| Solyc03g119980.2.1 | Tomato | cytosol | 59.18 | 62.08 |
| PGSC0003DMT400014303 | Potato | cytosol | 58.31 | 61.16 |
| AT1G52760.1 | Thale cress | cytosol | 57.73 | 59.64 |
| GSMUA_Achr7P08420_001 | Banana | cytosol | 60.64 | 58.92 |
| KRH02768 | Soybean | cytosol | 48.4 | 57.84 |
| CDY62163 | Canola | plastid | 36.73 | 57.8 |
| Bra030364.1-P | Field mustard | plastid | 36.73 | 57.8 |
| Os07t0565700-01 | Rice | cytosol | 41.4 | 42.52 |
| Os01t0837200-01 | Rice | cytosol | 13.12 | 37.82 |
| Os12t0262700-01 | Rice | cytosol | 28.57 | 33.11 |
| Os01t0317800-01 | Rice | plasma membrane | 30.9 | 32.22 |
| Os11t0100600-01 | Rice | cytosol | 30.61 | 31.63 |
| Os12t0100500-01 | Rice | cytosol | 30.61 | 31.63 |
| Os05t0363100-01 | Rice | cytosol, nucleus, peroxisome | 31.2 | 30.48 |
| Os01t0315700-01 | Rice | cytosol | 11.37 | 30.47 |
| Os10t0135600-01 | Rice | plastid | 26.24 | 24.39 |
| Os01t0688200-01 | Rice | plastid | 26.53 | 23.58 |
| Os09t0394700-01 | Rice | plastid | 27.11 | 23.43 |
| Os01t0315600-01 | Rice | cytosol, plasma membrane, plastid | 10.79 | 23.42 |
| Os01t0199400-01 | Rice | cytosol, endoplasmic reticulum, peroxisome | 24.78 | 21.52 |
| Os03t0719400-01 | Rice | endoplasmic reticulum, golgi | 23.32 | 20.41 |
Protein Annotations
| MapMan:21.6.1.3 | Gene3D:3.40.50.1820 | EntrezGene:4328684 | UniProt:A0A0P0VG76 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 |
| ProteinID:BAS77567.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003846 | GO:GO:0004622 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0005886 |
| GO:GO:0006629 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009506 |
| GO:GO:0010043 | GO:GO:0016020 | GO:GO:0016298 | GO:GO:0016740 | GO:GO:0016787 | GO:GO:0042542 |
| GO:GO:0046686 | GO:GO:0090430 | InterPro:Hydrolase_4 | InterPro:IPR029058 | EnsemblPlantsGene:Os02g0207900 | EnsemblPlants:Os02t0207900-01 |
| PFAM:PF12146 | PRINTS:PR00111 | PANTHER:PTHR11614 | PANTHER:PTHR11614:SF90 | SUPFAM:SSF53474 | UniParc:UPI0000DF05DE |
| RefSeq:XP_015623595.1 | SEG:seg | : | : | : | : |
Description
Similar to esterase/lipase/thioesterase family protein. (Os02t0207900-01)
Coordinates
chr2:-:6038222..6039551
Molecular Weight (calculated)
37325.3 Da
IEP (calculated)
6.517
GRAVY (calculated)
-0.110
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPPPPPPTA TKYFWGDSPE PDEYYASLGL RHAEAYFQSP CGRLFTHSFH PLSAASDGDV KGVVFMSHGY GSDSSWMFQN IAISYARWGY AVFCADLLGH
101: GRSDGVRGYL GDTEAVARAA LSFFLSVRRS GAYASLPAFL FGESMGGATT LLAYLRSPPD AGWAGIILSA PLLVFPDDMY PSRVRLFLYG LLFGLADTWA
201: VMPDKRMVGR SIRDPAKLRV IASNPRLYRG SPRVGTMREL ARVTALLRES FGEVAAPFLV VHGTDDGVTS PEGSRMLYER AASEDKSLIL YDGMYHSLIQ
301: GESDENRDRV LADMRAWIDE RVRRYGAGAG AAAADGHAEA PAA
101: GRSDGVRGYL GDTEAVARAA LSFFLSVRRS GAYASLPAFL FGESMGGATT LLAYLRSPPD AGWAGIILSA PLLVFPDDMY PSRVRLFLYG LLFGLADTWA
201: VMPDKRMVGR SIRDPAKLRV IASNPRLYRG SPRVGTMREL ARVTALLRES FGEVAAPFLV VHGTDDGVTS PEGSRMLYER AASEDKSLIL YDGMYHSLIQ
301: GESDENRDRV LADMRAWIDE RVRRYGAGAG AAAADGHAEA PAA
001: MPSEAESSAN SAPATPPPPP NFWGTMPEEE YYTSQGVRNS KSYFETPNGK LFTQSFLPLD GEIKGTVYMS HGYGSDTSWM FQKICMSFSS WGYAVFAADL
101: LGHGRSDGIR CYMGDMEKVA ATSLAFFKHV RCSDPYKDLP AFLFGESMGG LVTLLMYFQS EPETWTGLMF SAPLFVIPED MKPSKAHLFA YGLLFGLADT
201: WAAMPDNKMV GKAIKDPEKL KIIASNPQRY TGKPRVGTMR ELLRKTQYVQ ENFGKVTIPV FTAHGTADGV TCPTSSKLLY EKASSADKTL KIYEGMYHSL
301: IQGEPDENAE IVLKDMREWI DEKVKKYGSK TA
101: LGHGRSDGIR CYMGDMEKVA ATSLAFFKHV RCSDPYKDLP AFLFGESMGG LVTLLMYFQS EPETWTGLMF SAPLFVIPED MKPSKAHLFA YGLLFGLADT
201: WAAMPDNKMV GKAIKDPEKL KIIASNPQRY TGKPRVGTMR ELLRKTQYVQ ENFGKVTIPV FTAHGTADGV TCPTSSKLLY EKASSADKTL KIYEGMYHSL
301: IQGEPDENAE IVLKDMREWI DEKVKKYGSK TA
Arabidopsis Description
CSECaffeoylshikimate esterase [Source:UniProtKB/Swiss-Prot;Acc:Q9C942]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.