Factsheet for Os01t0317800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 18260611
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G051000.1	Wheat	cytosol	86.93	87.73
TraesCS4D01G051100.1	Wheat	cytosol, golgi	86.02	87.08
TraesCS4A01G263500.1	Wheat	cytosol	85.71	86.77
Zm00001d040681_P001	Maize	cytosol, mitochondrion	83.59	83.84
EES00674	Sorghum	cytosol	80.24	80.0
GSMUA_Achr1P08950_001	Banana	peroxisome	69.3	68.88
KRH34878	Soybean	cytosol	65.05	65.85
VIT_13s0019g04260.t01	Wine grape	cytosol	64.13	64.13
Bra020032.1-P	Field mustard	cytosol	63.22	62.09
CDY44908	Canola	cytosol	63.22	62.09
CDY69863	Canola	cytosol	63.22	62.09
AT5G19290.1	Thale cress	cytoskeleton, cytosol, plastid	61.7	61.52
Bra002224.1-P	Field mustard	cytosol	62.01	60.9
CDY13986	Canola	cytosol	62.01	60.9
CDX92543	Canola	cytosol	62.01	60.18
Solyc05g056000.2.1	Tomato	cytosol	60.79	59.7
PGSC0003DMT400060321	Potato	cytosol	60.49	59.4
AT5G14980.1	Thale cress	plastid	58.36	58.72
CDX85571	Canola	plastid	58.36	58.54
Os07t0565700-01	Rice	cytosol	40.73	40.12
Os12t0262700-01	Rice	cytosol	34.35	38.18
Os01t0837200-01	Rice	cytosol	12.16	33.61
Os11t0100600-01	Rice	cytosol	33.13	32.83
Os12t0100500-01	Rice	cytosol	33.13	32.83
Os05t0363100-01	Rice	cytosol, nucleus, peroxisome	34.65	32.48
Os02t0207900-01	Rice	plasma membrane	32.22	30.9
Os10t0135600-01	Rice	plastid	30.7	27.37
Os01t0315700-01	Rice	cytosol	10.33	26.56
Os01t0688200-01	Rice	plastid	30.4	25.91
Os01t0315600-01	Rice	cytosol, plasma membrane, plastid	10.64	22.15
Os01t0199400-01	Rice	cytosol, endoplasmic reticulum, peroxisome	25.53	21.27
Os09t0394700-01	Rice	plastid	24.92	20.65
Os03t0719400-01	Rice	endoplasmic reticulum, golgi	23.71	19.9

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	EntrezGene:4327269	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	EMBL:AK105905
ProteinID:BAB62599.1	ProteinID:BAB93436.1	ProteinID:BAF04797.1	ProteinID:BAS71824.1	ProteinID:EAZ11646.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016298	GO:GO:0016787	InterPro:Hydrolase_4	InterPro:IPR029058	EnsemblPlantsGene:Os01g0317800	EnsemblPlants:Os01t0317800-01
PFAM:PF12146	PRINTS:PR00111	PANTHER:PTHR11614	PANTHER:PTHR11614:SF101	UniProt:Q94D81	SUPFAM:SSF53474
UniParc:UPI00000ABC9D	RefSeq:XP_015628062.1	SEG:seg	:	:	:

Description

Alpha/beta hydrolase family protein. (Os01t0317800-01)

Coordinates

chr1:+:12067684..12068949

Molecular Weight (calculated)

35861.8 Da

IEP (calculated)

6.749

GRAVY (calculated)

-0.108

Length

329 amino acids

Sequence
(BLAST)

001: MAHPVAEADE KSPFGRLTAE EFYARHGVLH TSSTFVNPRG LRIFTQRWVP AGGDAPLLGA IAVVHGFTGE SSWTVQLTAV HFAKAGFAVA AVDHQGHGFS
101: EGLQGHIPDI VPVLEDCEAA FAPFRADYPP PLPCFLYGES LGGAIALLLH LRDKERWRDG AVLNGAMCGV SPRFMPPWPL EHLLWAAAAV APTWRLAFTR
201: GNIPDRSFKV PWKRALAVAS PRRTTAPPRA ATALELLRVC RELQSRFEEV ELPLLVVHGG EDTVCDPGCA EELHRRAGSK DKTLRVYPGM WHQLVGEPEE
301: NVDKVFGDVL DWLKSHAAAA AAARGEGQQ

Best Arabidopsis Sequence Match ( AT5G19290.1 )
(BLAST)

001: MGLHPISDAN EHNPFGSLTA DEFYAKHSVS HSSAFITNPR GLKLFTQWWS PLPPTKPIGI IAVVHGFTGE SSWFLQLTSI LFAKSGFITC AIDHQGHGFS
101: DGLIAHIPDI NPVVDDCISF FDDFRSRQTP SDLPCFLYSE SLGGAIALYI SLRQRGVWDG LILNGAMCGI SDKFKPPWPL EHLLFVVANL IPTWRVIPTR
201: GSIPDVSFKE PWKRKLAMAS PRRTVAKPRA ATAYELIRVC KDLQGRFEEV EVPLLIVHGG GDVVCDVACV EELHRRAISE DKTIKIYPEL WHQMIGESEE
301: KVDLVYGDML SWLKSRAERK ARAAVDGGAA

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZV6]
SUBAcon: [plastid,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.