Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytoskeleton, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020032.1-P | Field mustard | cytosol | 91.21 | 89.85 |
| CDY44908 | Canola | cytosol | 91.21 | 89.85 |
| CDY69863 | Canola | cytosol | 90.0 | 88.66 |
| Bra002224.1-P | Field mustard | cytosol | 88.79 | 87.46 |
| CDY13986 | Canola | cytosol | 88.18 | 86.87 |
| CDX92543 | Canola | cytosol | 88.18 | 85.84 |
| AT5G14980.1 | Thale cress | plastid | 74.24 | 74.92 |
| KRH34878 | Soybean | cytosol | 72.12 | 73.23 |
| VIT_13s0019g04260.t01 | Wine grape | cytosol | 67.88 | 68.09 |
| Solyc05g056000.2.1 | Tomato | cytosol | 69.09 | 68.06 |
| PGSC0003DMT400060321 | Potato | cytosol | 67.88 | 66.87 |
| GSMUA_Achr1P08950_001 | Banana | peroxisome | 65.15 | 64.95 |
| Os01t0317800-01 | Rice | plasma membrane | 61.52 | 61.7 |
| TraesCS4B01G051000.1 | Wheat | cytosol | 60.61 | 61.35 |
| TraesCS4A01G263500.1 | Wheat | cytosol | 60.3 | 61.23 |
| TraesCS4D01G051100.1 | Wheat | cytosol, golgi | 60.0 | 60.92 |
| Zm00001d040681_P001 | Maize | cytosol, mitochondrion | 60.0 | 60.37 |
| EES00674 | Sorghum | cytosol | 60.0 | 60.0 |
| AT1G11090.1 | Thale cress | cytosol | 37.58 | 38.27 |
| AT2G39410.2 | Thale cress | cytosol | 33.33 | 34.7 |
| AT2G39420.1 | Thale cress | cytosol | 32.12 | 33.44 |
| AT2G39400.1 | Thale cress | cytosol | 30.61 | 32.48 |
| AT3G55180.1 | Thale cress | cytosol | 30.0 | 31.73 |
| AT3G55190.1 | Thale cress | cytosol | 30.0 | 31.03 |
| AT3G62860.1 | Thale cress | cytosol | 30.3 | 28.74 |
| AT2G47630.1 | Thale cress | cytosol | 30.0 | 28.21 |
| AT1G52760.1 | Thale cress | cytosol | 28.18 | 28.01 |
| AT1G77420.1 | Thale cress | cytosol | 31.52 | 27.23 |
| AT5G16120.4 | Thale cress | mitochondrion | 28.48 | 24.54 |
| AT1G18360.1 | Thale cress | mitochondrion, plastid | 25.15 | 21.73 |
| AT5G11650.1 | Thale cress | plastid | 23.64 | 20.0 |
| AT1G73480.1 | Thale cress | mitochondrion, plastid | 26.97 | 19.22 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.1 | EntrezGene:832049 | UniProt:A0A178UL23 | InterPro:AB_hydrolase | ProteinID:AED92681.1 |
| ArrayExpress:AT5G19290 | EnsemblPlantsGene:AT5G19290 | RefSeq:AT5G19290 | TAIR:AT5G19290 | RefSeq:AT5G19290-TAIR-G | EnsemblPlants:AT5G19290.1 |
| TAIR:AT5G19290.1 | EMBL:AY063808 | EMBL:AY086477 | EMBL:BT000741 | EMBL:BT002367 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005794 | GO:GO:0005886 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0047372 | InterPro:Hydrolase_4 | InterPro:IPR029058 | RefSeq:NP_197430.1 | ProteinID:OAO93391.1 |
| PFAM:PF12146 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR11614 |
| PANTHER:PTHR11614:SF101 | UniProt:Q8VZV6 | MEROPS:S33.A24 | SUPFAM:SSF53474 | UniParc:UPI0000048B70 | SEG:seg |
Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZV6]
Coordinates
chr5:+:6493826..6495393
Molecular Weight (calculated)
36664.1 Da
IEP (calculated)
6.787
GRAVY (calculated)
-0.033
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLHPISDAN EHNPFGSLTA DEFYAKHSVS HSSAFITNPR GLKLFTQWWS PLPPTKPIGI IAVVHGFTGE SSWFLQLTSI LFAKSGFITC AIDHQGHGFS
101: DGLIAHIPDI NPVVDDCISF FDDFRSRQTP SDLPCFLYSE SLGGAIALYI SLRQRGVWDG LILNGAMCGI SDKFKPPWPL EHLLFVVANL IPTWRVIPTR
201: GSIPDVSFKE PWKRKLAMAS PRRTVAKPRA ATAYELIRVC KDLQGRFEEV EVPLLIVHGG GDVVCDVACV EELHRRAISE DKTIKIYPEL WHQMIGESEE
301: KVDLVYGDML SWLKSRAERK ARAAVDGGAA
101: DGLIAHIPDI NPVVDDCISF FDDFRSRQTP SDLPCFLYSE SLGGAIALYI SLRQRGVWDG LILNGAMCGI SDKFKPPWPL EHLLFVVANL IPTWRVIPTR
201: GSIPDVSFKE PWKRKLAMAS PRRTVAKPRA ATAYELIRVC KDLQGRFEEV EVPLLIVHGG GDVVCDVACV EELHRRAISE DKTIKIYPEL WHQMIGESEE
301: KVDLVYGDML SWLKSRAERK ARAAVDGGAA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.