Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85571 | Canola | plastid | 91.44 | 91.16 |
| AT5G19290.1 | Thale cress | cytoskeleton, cytosol, plastid | 74.92 | 74.24 |
| VIT_13s0019g04260.t01 | Wine grape | cytosol | 66.67 | 66.26 |
| KRH34878 | Soybean | cytosol | 65.75 | 66.15 |
| Solyc05g056000.2.1 | Tomato | cytosol | 66.36 | 64.78 |
| PGSC0003DMT400060321 | Potato | cytosol | 66.06 | 64.48 |
| GSMUA_Achr1P08950_001 | Banana | peroxisome | 61.47 | 60.73 |
| TraesCS4B01G051000.1 | Wheat | cytosol | 58.72 | 58.9 |
| TraesCS4D01G051100.1 | Wheat | cytosol, golgi | 58.1 | 58.46 |
| Os01t0317800-01 | Rice | plasma membrane | 58.72 | 58.36 |
| TraesCS4A01G263500.1 | Wheat | cytosol | 57.19 | 57.54 |
| Zm00001d040681_P001 | Maize | cytosol, mitochondrion | 56.88 | 56.71 |
| EES00674 | Sorghum | cytosol | 55.96 | 55.45 |
| AT1G11090.1 | Thale cress | cytosol | 36.39 | 36.73 |
| AT2G39410.2 | Thale cress | cytosol | 34.86 | 35.96 |
| AT2G39420.1 | Thale cress | cytosol | 33.64 | 34.7 |
| AT3G55180.1 | Thale cress | cytosol | 32.11 | 33.65 |
| AT2G39400.1 | Thale cress | cytosol | 31.8 | 33.44 |
| AT3G55190.1 | Thale cress | cytosol | 31.8 | 32.6 |
| AT1G52760.1 | Thale cress | cytosol | 31.8 | 31.33 |
| AT3G62860.1 | Thale cress | cytosol | 33.33 | 31.32 |
| AT2G47630.1 | Thale cress | cytosol | 32.42 | 30.2 |
| AT1G77420.1 | Thale cress | cytosol | 30.89 | 26.44 |
| AT5G16120.4 | Thale cress | mitochondrion | 29.05 | 24.8 |
| AT1G18360.1 | Thale cress | mitochondrion, plastid | 25.69 | 21.99 |
| AT5G11650.1 | Thale cress | plastid | 24.16 | 20.26 |
| AT1G73480.1 | Thale cress | mitochondrion, plastid | 26.91 | 19.01 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.1 | EntrezGene:831350 | InterPro:AB_hydrolase | ProteinID:AED92098.1 | ArrayExpress:AT5G14980 |
| EnsemblPlantsGene:AT5G14980 | RefSeq:AT5G14980 | TAIR:AT5G14980 | RefSeq:AT5G14980-TAIR-G | EnsemblPlants:AT5G14980.1 | TAIR:AT5G14980.1 |
| Unigene:At.54847 | ProteinID:CAC01817.1 | EMBL:DQ056679 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0047372 | InterPro:Hydrolase_4 |
| InterPro:IPR029058 | RefSeq:NP_197002.1 | PFAM:PF12146 | PO:PO:0000036 | PO:PO:0003011 | PO:PO:0007611 |
| PO:PO:0009010 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0025022 | PANTHER:PTHR11614 | PANTHER:PTHR11614:SF101 |
| UniProt:Q9LFQ7 | MEROPS:S33.A25 | SUPFAM:SSF53474 | UniParc:UPI0000048B3B | : | : |
Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LFQ7]
Coordinates
chr5:+:4849600..4850583
Molecular Weight (calculated)
36438.6 Da
IEP (calculated)
7.924
GRAVY (calculated)
-0.084
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLHPVSEAN ASSPFGSLSA AEFYSRHSVT HSSAYVTNPT GLKLFTQWWT PLNRPPLGLI AVVHGFTGES SWFLQLTSVL FAKSGYLTCA IDHQGHGFSD
101: GLTAHIPNIN LIVDDCISFF DDFRKRHASS FLPAFLYSES LGGAIALYIT LRQKHQWNGL ILSGAMCSIS HKFKPPWPLQ HLLTLAATLI PTWRVVPTRG
201: SIAGVSFKEP WKRKLAYANP NRTVGKPRAA TAYELVRVCE DLQNRFEEVE VPLMIVHGRD DVVCDPASVE ELYRRCSSRD KTIKIYPGMW HQLIGESEEN
301: VDLVFGDVLD WIKTRSEIST IHGGTKA
101: GLTAHIPNIN LIVDDCISFF DDFRKRHASS FLPAFLYSES LGGAIALYIT LRQKHQWNGL ILSGAMCSIS HKFKPPWPLQ HLLTLAATLI PTWRVVPTRG
201: SIAGVSFKEP WKRKLAYANP NRTVGKPRAA TAYELVRVCE DLQNRFEEVE VPLMIVHGRD DVVCDPASVE ELYRRCSSRD KTIKIYPGMW HQLIGESEEN
301: VDLVFGDVLD WIKTRSEIST IHGGTKA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.