Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93957 | Canola | cytosol | 79.02 | 91.36 |
| Bra014388.1-P | Field mustard | cytosol | 78.45 | 90.1 |
| CDX89152 | Canola | mitochondrion | 89.94 | 84.37 |
| AT2G47630.1 | Thale cress | cytosol | 82.18 | 81.48 |
| VIT_07s0005g00510.t01 | Wine grape | cytosol | 72.99 | 72.78 |
| Solyc09g075140.2.1 | Tomato | cytosol | 70.98 | 70.17 |
| GSMUA_Achr8P30050_001 | Banana | cytosol | 65.8 | 69.82 |
| PGSC0003DMT400081375 | Potato | cytosol | 70.11 | 69.32 |
| KRH68197 | Soybean | cytosol | 67.53 | 67.53 |
| EES00668 | Sorghum | cytosol | 67.24 | 67.24 |
| TraesCS2B01G395400.1 | Wheat | cytosol | 64.94 | 66.08 |
| TraesCS2D01G374700.1 | Wheat | cytosol | 64.94 | 66.08 |
| TraesCS2A01G378400.1 | Wheat | cytosol | 64.66 | 65.79 |
| EES18085 | Sorghum | cytosol | 66.38 | 65.44 |
| Zm00001d009907_P001 | Maize | cytosol | 64.37 | 65.12 |
| TraesCS1D01G231500.1 | Wheat | peroxisome | 63.79 | 64.91 |
| HORVU1Hr1G058820.2 | Barley | peroxisome | 62.93 | 64.79 |
| Zm00001d040666_P003 | Maize | cytosol | 64.94 | 64.57 |
| KRH69290 | Soybean | cytosol | 57.18 | 63.99 |
| Os05t0363100-01 | Rice | cytosol, nucleus, peroxisome | 61.78 | 61.25 |
| TraesCS1B01G243700.2 | Wheat | peroxisome | 63.51 | 58.93 |
| TraesCS1A01G230500.1 | Wheat | golgi, plastid | 59.77 | 56.99 |
| AT2G39410.2 | Thale cress | cytosol | 47.99 | 52.68 |
| HORVU2Hr1G090120.10 | Barley | plastid | 62.93 | 52.52 |
| AT2G39420.1 | Thale cress | cytosol | 47.41 | 52.05 |
| AT2G39400.1 | Thale cress | cytosol | 45.4 | 50.8 |
| AT3G55180.1 | Thale cress | cytosol | 45.11 | 50.32 |
| Os01t0315600-01 | Rice | cytosol, plasma membrane, plastid | 22.41 | 49.37 |
| AT3G55190.1 | Thale cress | cytosol | 41.38 | 45.14 |
| Os01t0315700-01 | Rice | cytosol | 16.38 | 44.53 |
| AT1G11090.1 | Thale cress | cytosol | 36.78 | 39.51 |
| AT5G16120.4 | Thale cress | mitochondrion | 39.08 | 35.51 |
| AT5G14980.1 | Thale cress | plastid | 31.32 | 33.33 |
| AT1G77420.1 | Thale cress | cytosol | 34.48 | 31.41 |
| AT1G52760.1 | Thale cress | cytosol | 29.6 | 31.02 |
| AT5G19290.1 | Thale cress | cytoskeleton, cytosol, plastid | 28.74 | 30.3 |
| AT5G11650.1 | Thale cress | plastid | 25.57 | 22.82 |
| AT1G18360.1 | Thale cress | mitochondrion, plastid | 24.43 | 22.25 |
| AT1G73480.1 | Thale cress | mitochondrion, plastid | 25.57 | 19.22 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:5.7.1.1 | EntrezGene:825461 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 | ProteinID:AEE80403.1 |
| ArrayExpress:AT3G62860 | EnsemblPlantsGene:AT3G62860 | RefSeq:AT3G62860 | TAIR:AT3G62860 | RefSeq:AT3G62860-TAIR-G | EnsemblPlants:AT3G62860.1 |
| TAIR:AT3G62860.1 | UniProt:F4IZK0 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005886 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016298 | GO:GO:0016787 |
| InterPro:Hydrolase_4 | InterPro:IPR029058 | RefSeq:NP_191845.2 | PFAM:PF12146 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001185 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR00111 | PANTHER:PTHR11614 | PANTHER:PTHR11614:SF120 | SUPFAM:SSF53474 | UniParc:UPI00001970A0 |
| SEG:seg | : | : | : | : | : |
Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IZK0]
Coordinates
chr3:-:23239264..23242274
Molecular Weight (calculated)
39181.2 Da
IEP (calculated)
8.201
GRAVY (calculated)
-0.283
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKFKFQYEE EYIKNSRDVE LFACRWLPSS SPRALVFLCH GYGMECSSFM RECGIRLASA GYAVFGMDYE GHGRSKGARC YIKKFSNIVN DCFDYYTSIS
101: AQEEYKEKGR FLYGESMGGA VALLLHKKDP SFWNGALLVA PMCKISEKVK PHPVVINLLT RVEDIIPKWK IVPTKDVIDA AFKDPVKREE IRNNKLIYQD
201: KPRLKTALEM LRTSMDLEDT LHEITLPFFV LHGEADIVTD PEISKALFEK ASTRDKTIKL YPGMWHGLTS GEPDANVDLV FADIVNWLDA RTGDSASLTV
301: TPVHDFTSNV QKVVDGVSNG QGKSKRPQAS LLCGLNGGGR RLVHRSSM
101: AQEEYKEKGR FLYGESMGGA VALLLHKKDP SFWNGALLVA PMCKISEKVK PHPVVINLLT RVEDIIPKWK IVPTKDVIDA AFKDPVKREE IRNNKLIYQD
201: KPRLKTALEM LRTSMDLEDT LHEITLPFFV LHGEADIVTD PEISKALFEK ASTRDKTIKL YPGMWHGLTS GEPDANVDLV FADIVNWLDA RTGDSASLTV
301: TPVHDFTSNV QKVVDGVSNG QGKSKRPQAS LLCGLNGGGR RLVHRSSM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.