CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040666_P003	Maize	cytosol	90.8	90.29
TraesCS2D01G374700.1	Wheat	cytosol	82.76	84.21
TraesCS2A01G378400.1	Wheat	cytosol	82.18	83.63
TraesCS2B01G395400.1	Wheat	cytosol	81.32	82.75
EES18085	Sorghum	cytosol	76.15	75.07
GSMUA_Achr8P30050_001	Banana	cytosol	67.24	71.34
Os01t0315700-01	Rice	cytosol	26.15	71.09
VIT_07s0005g00510.t01	Wine grape	cytosol	69.25	69.05
CDX76667	Canola	cytosol	66.09	68.05
KRH68197	Soybean	cytosol	67.53	67.53
AT3G62860.1	Thale cress	cytosol	67.24	67.24
HORVU2Hr1G090120.10	Barley	plastid	80.46	67.15
Solyc09g075140.2.1	Tomato	cytosol	67.82	67.05
PGSC0003DMT400081375	Potato	cytosol	67.53	66.76
CDX83323	Canola	cytosol	66.38	66.57
CDX95729	Canola	cytosol	66.09	66.28
CDX93957	Canola	cytosol	56.9	65.78
Bra014388.1-P	Field mustard	cytosol	57.18	65.68
Os01t0315600-01	Rice	cytosol, plasma membrane, plastid	29.6	65.19
CDY27476	Canola	cytosol	64.66	64.84
CDY55538	Canola	cytosol	64.66	64.66
AT2G47630.1	Thale cress	cytosol	64.94	64.39
KRH69290	Soybean	cytosol	56.03	62.7
CDX89152	Canola	mitochondrion	66.38	62.26
CDY11452	Canola	cytosol	58.62	53.68
OQU82666	Sorghum	endoplasmic reticulum, golgi	47.7	53.38
EES03847	Sorghum	cytosol	47.13	53.07
Bra021437.1-P	Field mustard	cytosol	46.55	52.77
EES16469	Sorghum	cytosol	48.56	48.99
EES09069	Sorghum	cytosol	48.56	48.42
OQU87824	Sorghum	cytosol	39.66	45.85
KXG22743	Sorghum	cytosol	37.64	45.8
EER99555	Sorghum	cytosol	38.51	39.65
Bra007707.1-P	Field mustard	cytosol	63.22	39.22
OQU91987	Sorghum	cytosol	41.09	37.43
EES00674	Sorghum	cytosol	32.47	34.24
KXG33155	Sorghum	plastid	35.34	33.42
Bra000456.1-P	Field mustard	nucleus	64.37	26.67
EES00118	Sorghum	cytosol, nucleus, plastid, vacuole	27.59	23.76
EER90977	Sorghum	endoplasmic reticulum, golgi, plastid	26.72	23.72
EER98863	Sorghum	plastid	27.01	22.98

Protein Annotations

Gene3D:3.40.50.1820	MapMan:5.7.1.1	EntrezGene:8079634	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	UniProt:C5XIV4
EnsemblPlants:EES00668	ProteinID:EES00668	ProteinID:EES00668.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016298	GO:GO:0016787
InterPro:Hydrolase_4	InterPro:IPR029058	PFAM:PF12146	PRINTS:PR00111	PANTHER:PTHR11614	PANTHER:PTHR11614:SF120
EnsemblPlantsGene:SORBI_3003G149400	SUPFAM:SSF53474	UniParc:UPI0001A844C0	RefSeq:XP_002455548.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:15764837..15770808

Molecular Weight (calculated)

39512.9 Da

IEP (calculated)

8.666

GRAVY (calculated)

-0.321

Length

348 amino acids

Sequence
(BLAST)

001: MEVEYHEEYV RNSRGVQLFT CGWLPVATSP KALVFLCHGY GMECSGFMRE CGMRLAAAGY GVFGMDYEGH GKSMGARCYI RSFRRLVDDC SHFFKSICEL
101: EEYRGKSRFL YGESMGGAVA LLLHRKDPAF WDGAVLVAPM CKISEKVKPH PVVITLLTQV EDVIPKWKIV PTKQDVIDAA FKDPVKREKI RRNKLIYQDK
201: PRLKTALEML RTSMYIEDSL SQVKLPFFVL HGEADTVTDP EVSRALYERA ASADKTIKLY PGMWHGLTAG ETDENVEAVF SDIVSWLNQR CRSWTMEDRF
301: RKLVPAPAKF IHGDDAVDGK AQTQGRPRRR RPGLLCGLAG RTHHHAEM

Best Arabidopsis Sequence Match ( AT3G62860.1 )
(BLAST)

001: MMKFKFQYEE EYIKNSRDVE LFACRWLPSS SPRALVFLCH GYGMECSSFM RECGIRLASA GYAVFGMDYE GHGRSKGARC YIKKFSNIVN DCFDYYTSIS
101: AQEEYKEKGR FLYGESMGGA VALLLHKKDP SFWNGALLVA PMCKISEKVK PHPVVINLLT RVEDIIPKWK IVPTKDVIDA AFKDPVKREE IRNNKLIYQD
201: KPRLKTALEM LRTSMDLEDT LHEITLPFFV LHGEADIVTD PEISKALFEK ASTRDKTIKL YPGMWHGLTS GEPDANVDLV FADIVNWLDA RTGDSASLTV
301: TPVHDFTSNV QKVVDGVSNG QGKSKRPQAS LLCGLNGGGR RLVHRSSM

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IZK0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.