CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035779_P002	Maize	cytosol	87.46	87.46
TraesCS5D01G163000.1	Wheat	cytosol	77.17	80.27
Os12t0262700-01	Rice	cytosol	76.21	80.07
HORVU5Hr1G049360.1	Barley	cytosol	76.85	79.93
TraesCS5A01G157600.2	Wheat	cytosol	76.53	79.6
TraesCS5B01G156100.1	Wheat	cytosol	76.21	79.26
KXG22743	Sorghum	cytosol	67.52	73.43
GSMUA_Achr10P...	Banana	cytosol	61.41	61.41
EES03847	Sorghum	cytosol	53.05	53.4
EES09069	Sorghum	cytosol	55.95	49.86
EES16469	Sorghum	cytosol	55.31	49.86
OQU87824	Sorghum	cytosol	46.62	48.17
EES00668	Sorghum	cytosol	53.38	47.7
EES18085	Sorghum	cytosol	51.45	45.33
EER99555	Sorghum	cytosol	37.94	34.91
OQU91987	Sorghum	cytosol	39.55	32.2
KXG33155	Sorghum	plastid	37.62	31.79
EES00674	Sorghum	cytosol	32.8	30.91
EER90977	Sorghum	endoplasmic reticulum, golgi, plastid	29.9	23.72
EER98863	Sorghum	plastid	30.87	23.47
EES00118	Sorghum	cytosol, nucleus, plastid, vacuole	29.58	22.77

Protein Annotations

EnsemblPlants:OQU82666	EnsemblPlantsGene:SORBI_3005G000200	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF103	PFAM:PF12146	PRINTS:PR00111	ProteinID:OQU82666
ProteinID:OQU82666.1	SignalP:SignalP-noTM	SUPFAM:SSF53474	UniParc:UPI000B8BA249	UniProt:A0A1Z5RH27	MapMan:5.7.1.1

Description

hypothetical protein

Coordinates

chr5:-:43120..45709

Molecular Weight (calculated)

35082.6 Da

IEP (calculated)

6.976

GRAVY (calculated)

-0.062

Length

311 amino acids

Sequence
(BLAST)

001: MKSHSLNLIP CFLSISSTWI FVFQEYVLNA RGINLFTCQW RPLNSEPKAV IFLCHGYAME CSISMRGTGT RLAQAGFVVH GMDYEGHGKS SGLQGYISSF
101: DDIVVDCSKY FASVCEKEEY KKQKRFLLGE SMGGAIVLML HRKEPSFWDG AILVAPMCKI VEDMKPHPIV ISILSKLSNV IPTWRIIPNE DIIDRAIKSE
201: EWREEVRNNH YCYKGKPRVK TGYEIFMASL DIESNLDKVT LPFIIVHGGD DAVTDPTVSE ALYTLAKSKD KTLKLYPGMC HALTSGEPKE NIDIVFADII
301: KWLNERVPSI S

Best Arabidopsis Sequence Match ( AT3G55180.1 )
(BLAST)

001: MVMYKEDYVS NSRGIQLFTC SWKQEEQQEP KALIFLCHGY AMESSITMSS TAVRLANAGF SVYGMDYEGH GKSGGLNGYV KKFDDLVQDV SSHYSSICEL
101: EENKGKMRFL MGESMGGAVV LLLERKKPNF WDGAVLVAPM CKLAEDIKPH PMVISFLTKL TRFIPTWKIV PSNDIIDVAF KETHIRKQVR DNEYCYKGRP
201: RLKTAHQLLM VSLDLEKNLD QVSMPFIVLH GEDDKVTDKN VSKLLYEVAS SSDKTFKLYP NMWHGLLYGE SPENLEIVFS DIISWLKERA SVTNQKLETE
301: LKHVDDGFSM QK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M3D1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.