CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009907_P001	Maize	cytosol	88.39	90.7
TraesCS1D01G231500.1	Wheat	peroxisome	81.3	83.92
HORVU1Hr1G058820.2	Barley	peroxisome	78.47	81.95
Os05t0363100-01	Rice	cytosol, nucleus, peroxisome	78.47	78.92
TraesCS1B01G243700.2	Wheat	peroxisome	81.02	76.27
EES00668	Sorghum	cytosol	75.07	76.15
GSMUA_Achr8P30050_001	Banana	cytosol	68.56	73.78
TraesCS1A01G230500.1	Wheat	golgi, plastid	76.2	73.7
VIT_07s0005g00510.t01	Wine grape	cytosol	69.69	70.49
Solyc09g075140.2.1	Tomato	cytosol	66.57	66.76
KRH68197	Soybean	cytosol	65.72	66.67
CDX76667	Canola	cytosol	63.74	66.57
AT3G62860.1	Thale cress	cytosol	65.44	66.38
CDX83323	Canola	cytosol	65.16	66.28
CDX95729	Canola	cytosol	64.87	65.99
PGSC0003DMT400081375	Potato	cytosol	65.72	65.91
AT2G47630.1	Thale cress	cytosol	64.59	64.96
CDY27476	Canola	cytosol	63.74	64.84
CDY55538	Canola	cytosol	63.74	64.66
Bra014388.1-P	Field mustard	cytosol	54.96	64.03
CDX93957	Canola	cytosol	54.11	63.46
KRH69290	Soybean	cytosol	55.52	63.02
CDX89152	Canola	mitochondrion	63.74	60.65
Bra021437.1-P	Field mustard	cytosol	47.03	54.07
EES03847	Sorghum	cytosol	46.74	53.4
CDY11452	Canola	cytosol	56.37	52.37
OQU82666	Sorghum	endoplasmic reticulum, golgi	45.33	51.45
EES16469	Sorghum	cytosol	49.29	50.43
EES09069	Sorghum	cytosol	49.86	50.43
OQU87824	Sorghum	cytosol	39.38	46.18
KXG22743	Sorghum	cytosol	36.26	44.76
EER99555	Sorghum	cytosol	38.24	39.94
Bra007707.1-P	Field mustard	cytosol	60.34	37.97
OQU91987	Sorghum	cytosol	39.94	36.91
EES00674	Sorghum	cytosol	32.01	34.24
KXG33155	Sorghum	plastid	34.84	33.42
Bra000456.1-P	Field mustard	nucleus	63.46	26.67
EER90977	Sorghum	endoplasmic reticulum, golgi, plastid	25.5	22.96
EES00118	Sorghum	cytosol, nucleus, plastid, vacuole	26.06	22.77
EER98863	Sorghum	plastid	25.78	22.25

Protein Annotations

Gene3D:3.40.50.1820	MapMan:5.7.1.1	EntrezGene:8077900	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	UniProt:C5YWV2
EnsemblPlants:EES18085	ProteinID:EES18085	ProteinID:EES18085.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016298	GO:GO:0016787
InterPro:Hydrolase_4	InterPro:IPR029058	PFAM:PF12146	PRINTS:PR00111	PANTHER:PTHR11614	PANTHER:PTHR11614:SF120
EnsemblPlantsGene:SORBI_3009G112500	SUPFAM:SSF53474	unigene:Sbi.16851	UniParc:UPI0001A88CB6	RefSeq:XP_002439655.1	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:45256715..45263264

Molecular Weight (calculated)

39932.0 Da

IEP (calculated)

7.884

GRAVY (calculated)

-0.425

Length

353 amino acids

Sequence
(BLAST)

001: MMDVVYHEEY VRNPRGVQLF TCGWLPPASS SPPKALVFLC HGYGMECSDF MRACGIKLAT AGYGVFGIDY EGHGKSMGAR CYIQKFENLV ADCDRFFKSI
101: CDMEEYRNKS RFLYGESMGG AVALLLHRKD PTFWDGAVLV APMCKISEKV KPHPVVVTLL TQVEEIIPKW KIVPTKDVID SAFKDPVKRE KIRKNKLIYQ
201: DKPRLKTALE LLRTSMDVED SLSEVTMPFF ILHGEADTVT DPEVSRALYE RAASTDKTIK LYPGMWHGLT AGEPDENVEL VFSDIVSWLD KRSRHWEQDE
301: RARTPPEPEN KHRQAATTKI TRVTSSSGGT ESQRRGSCLC GLGGRPHQQQ CRM

Best Arabidopsis Sequence Match ( AT2G47630.1 )
(BLAST)

001: MKSSEFQYHE EYVRNSRGVE LFACRWIPSS SSSPKALVFL CHGYGMECSD SMKECGIRLA SAGYAVFGMD YEGHGRSMGS RCYIKKFANV VNDCYDYYTS
101: ICAQEEYMDK GRFLYGESMG GAVTLLLHKK DPLFWNGAIL VAPMCKISEK VKPHPIVINL LTRVEEIIPK WKIVPTKDVI DAAFKDLVKR EEVRNNKLIY
201: QDKPRLKTAL EMLRTSMNLE DTLHEITMPF FVLHGEADTV TDPEVSKALY EKASTRDKTL KLYPGMWHAL TSGEPDCNVD LVFADIINWL DLRTADPASL
301: TVTPIRVGNT TSVQRVTTVN GVSNGHRRPK RPFFNLLCGL NRGRLVPRST V

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:O22248]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.