Factsheet for VIT_17s0000g01070.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g01010.t01	Wine grape	plastid	92.23	92.0
Solyc03g098020.2.1	Tomato	plastid	66.67	65.2
PGSC0003DMT400083974	Potato	plastid	66.67	65.2
KRH39013	Soybean	cytosol, mitochondrion, peroxisome, plastid	28.07	64.0
KRH60583	Soybean	peroxisome	45.11	63.38
Bra003843.1-P	Field mustard	golgi, vacuole	60.4	63.09
KRH48707	Soybean	endoplasmic reticulum, golgi	59.65	62.96
KRH41883	Soybean	endoplasmic reticulum, golgi	54.39	60.28
CDX72991	Canola	plastid	61.15	59.95
Bra015989.1-P	Field mustard	plastid	60.65	59.46
GSMUA_Achr10P...	Banana	extracellular	37.34	58.89
CDX83852	Canola	plastid	53.13	55.94
CDX96478	Canola	plastid	50.63	55.8
AT1G18360.1	Thale cress	mitochondrion, plastid	53.38	55.76
CDX96722	Canola	plastid	53.38	54.9
AT1G73480.1	Thale cress	mitochondrion, plastid	63.41	54.64
CDY11104	Canola	plastid	63.16	54.55
Os03t0719400-01	Rice	endoplasmic reticulum, golgi	53.38	54.34
HORVU4Hr1G008550.3	Barley	endoplasmic reticulum, golgi	51.63	54.07
Zm00001d033797_P002	Maize	endoplasmic reticulum, golgi	53.13	53.81
TraesCS4D01G051900.2	Wheat	endoplasmic reticulum, golgi	51.63	53.79
CDX68225	Canola	mitochondrion	62.66	53.76
TraesCS4A01G263200.1	Wheat	endoplasmic reticulum, golgi	51.38	53.66
TraesCS4B01G051600.1	Wheat	endoplasmic reticulum, golgi	51.63	53.65
EER90977	Sorghum	endoplasmic reticulum, golgi, plastid	52.63	53.57
Zm00001d013406_P002	Maize	endoplasmic reticulum, golgi, mitochondrion	52.13	53.47
Bra016558.1-P	Field mustard	cytosol, nucleus, plastid	51.38	52.3
TraesCS5A01G202900.1	Wheat	mitochondrion, plastid	48.87	50.0
TraesCS5B01G201400.1	Wheat	mitochondrion, plastid	48.87	50.0
TraesCS5D01G209300.2	Wheat	mitochondrion, plastid	48.62	49.49
EER98863	Sorghum	plastid	50.13	48.9
Os09t0394700-01	Rice	plastid	48.62	48.87
VIT_04s0008g03220.t01	Wine grape	cytosol	48.37	48.37
Zm00001d020380_P002	Maize	plastid	49.62	47.6
VIT_10s0116g00730.t01	Wine grape	cytosol	25.56	32.48
VIT_00s0317g00110.t01	Wine grape	cytosol	25.56	31.97
VIT_09s0002g05730.t01	Wine grape	cytosol	21.3	26.48
VIT_07s0005g00510.t01	Wine grape	cytosol	23.06	26.36
VIT_14s0006g02900.t01	Wine grape	plastid	25.06	25.97
VIT_13s0019g04260.t01	Wine grape	cytosol	21.05	25.53
VIT_01s0011g03620.t01	Wine grape	cytosol, plastid	25.56	24.46
VIT_10s0003g04950.t01	Wine grape	cytosol	19.55	23.78

Protein Annotations

EntrezGene:100262570	wikigene:100262570	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	ProteinID:CCB60928
ProteinID:CCB60928.1	UniProt:F6I1W1	EMBL:FN596517	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016298	GO:GO:0016787
InterPro:Hydrolase_4	InterPro:IPR029058	EntrezGene:LOC100262570	wikigene:LOC100262570	PFAM:PF12146	PANTHER:PTHR11614
PANTHER:PTHR11614:SF114	SUPFAM:SSF53474	TIGR:TC62950	TMHMM:TMhelix	UniParc:UPI00015CC8EF	ArrayExpress:VIT_17s0000g01070
EnsemblPlantsGene:VIT_17s0000g01070	EnsemblPlants:VIT_17s0000g01070.t01	unigene:Vvi.9852	RefSeq:XP_002263188	RefSeq:XP_002263188.1	SEG:seg

Description

No Description!

Coordinates

chr17_random:+:753178..773144

Molecular Weight (calculated)

43362.8 Da

IEP (calculated)

8.966

GRAVY (calculated)

0.135

Length

399 amino acids

Sequence
(BLAST)

001: MARVADASAS IMLTSGASGL ISAVLSVRAL RSLVVLVRAL VLLLLVPFRG RRGSVDRPKD DKHEVTHASI RKVPVVRVPA TVPWRCGAAV AVDQDVAARR
101: ALAIGRVVQE GGGGEKSVRE FSLLTTLRGD TLFTQSWTPL RVKLRGLIVL MHGLNEHSGR YSDLGEQLNA NGYKVFGMDW IGHGGSDGLH AYVPSLDYAV
201: TDLQTFLQKV LAENPGLPCF CFGHSTGAAI ILKAILDPKI EGCIEGVVLT SPAVGVKPPH PIFTVLAPVV SFFIPRFQCR AANKQGISVS RDPAALLAKY
301: SDPLVYTGSI RVKTGYEILR ISTYLQQNLS RLRVPFLVLH GAADNVTDPE ASKTLHEEAA STDKTFKLYE GLLHDLLFEP EREAIMKDII EWLNCRVDG

Best Arabidopsis Sequence Match ( AT1G73480.1 )
(BLAST)

001: MICSSKGTIL IARGKNSNTI PRLPLKGSST NYANRIQIRN PISVKTFRRS SSSSMAVETM SMGSDSSTLI LTSGASGRVR VLFSMRELKR LVTIIQSLIL
101: FLLLPFRVVV WRRRTGAVVI RDDKQERKVW SPPQIVVRKR NIGGESSVSP PSVPAAVVDG EVAVRRELAI KRVLEDEGGD GSSVRDYSLF TTKRGDTLFS
201: QSWSPLSPNH RGLIVLLHGL NEHSGRYSDF AKQLNANGFK VYGIDWIGHG GSDGLHAYVP SLDYAVTDLK SFLEKVFTEN PGLPCFCFGH STGGAIILKA
301: MLDPKIESRV SGIALTSPAV GVQPSHPIFA VLAPIMAFLL PRYQISAANK KGMPVSRDPA ALIAKYSDPL VFTGSIRVKT GYEILRITAH LQQNLNKVKV
401: PFLVMHGTDD TVTDPSASKK LYEEAASSDK SLKLYDGLLH DLLFEPEREI IAGAILDWLN QRV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94AM5]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.