Factsheet for VIT_17s0000g01010.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g01070.t01	Wine grape	plastid	92.0	92.23
KRH39013	Soybean	cytosol, mitochondrion, peroxisome, plastid	29.5	67.43
Solyc03g098020.2.1	Tomato	plastid	68.5	67.16
PGSC0003DMT400083974	Potato	plastid	68.5	67.16
KRH60583	Soybean	peroxisome	47.25	66.55
KRH48707	Soybean	endoplasmic reticulum, golgi	62.0	65.61
Bra003843.1-P	Field mustard	golgi, vacuole	62.25	65.18
KRH41883	Soybean	endoplasmic reticulum, golgi	56.75	63.06
CDX72991	Canola	plastid	63.25	62.16
Bra015989.1-P	Field mustard	plastid	62.75	61.67
GSMUA_Achr10P...	Banana	extracellular	37.75	59.68
AT1G18360.1	Thale cress	mitochondrion, plastid	55.25	57.85
CDX96478	Canola	plastid	52.0	57.46
CDX83852	Canola	plastid	54.0	56.99
CDY11104	Canola	plastid	65.5	56.71
HORVU4Hr1G008550.3	Barley	endoplasmic reticulum, golgi	53.5	56.17
AT1G73480.1	Thale cress	mitochondrion, plastid	64.75	55.94
CDX68225	Canola	mitochondrion	65.0	55.91
TraesCS4D01G051900.2	Wheat	endoplasmic reticulum, golgi	53.5	55.87
TraesCS4A01G263200.1	Wheat	endoplasmic reticulum, golgi	53.25	55.76
TraesCS4B01G051600.1	Wheat	endoplasmic reticulum, golgi	53.5	55.73
CDX96722	Canola	plastid	54.0	55.67
Os03t0719400-01	Rice	endoplasmic reticulum, golgi	54.25	55.36
Zm00001d033797_P002	Maize	endoplasmic reticulum, golgi	53.5	54.31
EER90977	Sorghum	endoplasmic reticulum, golgi, plastid	53.0	54.08
Zm00001d013406_P002	Maize	endoplasmic reticulum, golgi, mitochondrion	52.5	53.98
Bra016558.1-P	Field mustard	cytosol, nucleus, plastid	52.25	53.32
TraesCS5A01G202900.1	Wheat	mitochondrion, plastid	50.25	51.54
TraesCS5B01G201400.1	Wheat	mitochondrion, plastid	50.25	51.54
TraesCS5D01G209300.2	Wheat	mitochondrion, plastid	50.0	51.02
EER98863	Sorghum	plastid	51.75	50.61
Os09t0394700-01	Rice	plastid	50.0	50.38
Zm00001d020380_P002	Maize	plastid	51.0	49.04
VIT_04s0008g03220.t01	Wine grape	cytosol	48.75	48.87
VIT_10s0116g00730.t01	Wine grape	cytosol	25.75	32.8
VIT_00s0317g00110.t01	Wine grape	cytosol	25.0	31.35
VIT_07s0005g00510.t01	Wine grape	cytosol	23.5	26.93
VIT_14s0006g02900.t01	Wine grape	plastid	25.75	26.75
VIT_09s0002g05730.t01	Wine grape	cytosol	21.25	26.48
VIT_13s0019g04260.t01	Wine grape	cytosol	21.25	25.84
VIT_01s0011g03620.t01	Wine grape	cytosol, plastid	26.75	25.66
VIT_10s0003g04950.t01	Wine grape	cytosol	18.75	22.87

Protein Annotations

EntrezGene:100257447	wikigene:100257447	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	ProteinID:CBI38265
ProteinID:CBI38265.3	UniProt:D7U696	EMBL:FN596517	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016298	GO:GO:0016787
InterPro:Hydrolase_4	InterPro:IPR029058	EntrezGene:LOC100257447	wikigene:LOC100257447	PFAM:PF12146	PANTHER:PTHR11614
PANTHER:PTHR11614:SF114	SUPFAM:SSF53474	UniParc:UPI0001985AA3	ArrayExpress:VIT_17s0000g01010	EnsemblPlantsGene:VIT_17s0000g01010	EnsemblPlants:VIT_17s0000g01010.t01
unigene:Vvi.25746	RefSeq:XP_002263219	RefSeq:XP_002263219.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr17_random:+:725204..732164

Molecular Weight (calculated)

43440.8 Da

IEP (calculated)

9.582

GRAVY (calculated)

0.090

Length

400 amino acids

Sequence
(BLAST)

001: MAKVTDASAS IMLTSGASGR INALLSVRAL RSLVVLVKAL VLLLLVPFRG RRGSVDRPKD EKQEVAPASV RKAPVVRVPA TVTWRCGAAA VDQDVAARRA
101: LAIGRVVQES GGGGGEKSVR EFSLLVTIRG DTLFTQSWTP LRVKIRGLIV LMHGLNEHSG RYSDFAKQLN ANGYKVFGMD WIGHGGSDGL HAYVPSLDYA
201: VTDLKTFIQK VLAENPGLPC FCFGHSTGAA IILKAVLDPK IEACIEGVVL TSPAVGVKPS HPIFTVLAPV VSFFIPRYQC RAANKQGITV SRDPAALLAK
301: YSDPLVYTGS IRVKTGYEIL RISTYLQQNL SRLRVPFLVL HGAADNVTDP EASKKLHEEA SSTDKTFKLY EGLLHDLLFE PEREAITQDI IEWLNCRVDG

Best Arabidopsis Sequence Match ( AT1G73480.1 )
(BLAST)

001: MICSSKGTIL IARGKNSNTI PRLPLKGSST NYANRIQIRN PISVKTFRRS SSSSMAVETM SMGSDSSTLI LTSGASGRVR VLFSMRELKR LVTIIQSLIL
101: FLLLPFRVVV WRRRTGAVVI RDDKQERKVW SPPQIVVRKR NIGGESSVSP PSVPAAVVDG EVAVRRELAI KRVLEDEGGD GSSVRDYSLF TTKRGDTLFS
201: QSWSPLSPNH RGLIVLLHGL NEHSGRYSDF AKQLNANGFK VYGIDWIGHG GSDGLHAYVP SLDYAVTDLK SFLEKVFTEN PGLPCFCFGH STGGAIILKA
301: MLDPKIESRV SGIALTSPAV GVQPSHPIFA VLAPIMAFLL PRYQISAANK KGMPVSRDPA ALIAKYSDPL VFTGSIRVKT GYEILRITAH LQQNLNKVKV
401: PFLVMHGTDD TVTDPSASKK LYEEAASSDK SLKLYDGLLH DLLFEPEREI IAGAILDWLN QRV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94AM5]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.