Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G051600.1 | Wheat | endoplasmic reticulum, golgi | 99.48 | 99.22 |
| TraesCS4A01G263200.1 | Wheat | endoplasmic reticulum, golgi | 98.43 | 98.69 |
| HORVU4Hr1G008550.3 | Barley | endoplasmic reticulum, golgi | 94.26 | 94.75 |
| Os03t0719400-01 | Rice | endoplasmic reticulum, golgi | 79.9 | 78.06 |
| Zm00001d013406_P002 | Maize | endoplasmic reticulum, golgi, mitochondrion | 77.55 | 76.35 |
| EER90977 | Sorghum | endoplasmic reticulum, golgi, plastid | 78.07 | 76.28 |
| Zm00001d033797_P002 | Maize | endoplasmic reticulum, golgi | 78.07 | 75.89 |
| GSMUA_Achr10P... | Banana | extracellular | 37.86 | 57.31 |
| KRH60583 | Soybean | peroxisome | 40.99 | 55.28 |
| Solyc03g098020.2.1 | Tomato | plastid | 58.22 | 54.66 |
| PGSC0003DMT400083974 | Potato | plastid | 57.96 | 54.41 |
| KRH39013 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 24.54 | 53.71 |
| KRH48707 | Soybean | endoplasmic reticulum, golgi | 53.0 | 53.7 |
| VIT_17s0000g01010.t01 | Wine grape | plastid | 55.87 | 53.5 |
| Bra003843.1-P | Field mustard | golgi, vacuole | 52.74 | 52.88 |
| KRH41883 | Soybean | endoplasmic reticulum, golgi | 49.61 | 52.78 |
| VIT_17s0000g01070.t01 | Wine grape | plastid | 53.79 | 51.63 |
| Bra015989.1-P | Field mustard | plastid | 54.05 | 50.86 |
| CDX72991 | Canola | plastid | 53.52 | 50.37 |
| CDX96478 | Canola | plastid | 45.95 | 48.62 |
| CDX83852 | Canola | plastid | 46.48 | 46.97 |
| TraesCS5D01G209300.2 | Wheat | mitochondrion, plastid | 48.04 | 46.94 |
| AT1G18360.1 | Thale cress | mitochondrion, plastid | 46.74 | 46.86 |
| CDX96722 | Canola | plastid | 47.0 | 46.39 |
| CDY11104 | Canola | plastid | 55.09 | 45.67 |
| TraesCS3D01G142300.1 | Wheat | cytosol | 46.21 | 45.5 |
| AT1G73480.1 | Thale cress | mitochondrion, plastid | 54.83 | 45.36 |
| CDX68225 | Canola | mitochondrion | 54.83 | 45.16 |
| Bra016558.1-P | Field mustard | cytosol, nucleus, plastid | 44.39 | 43.37 |
| TraesCS3D01G349100.1 | Wheat | cytosol | 23.76 | 30.43 |
| TraesCS5D01G163000.1 | Wheat | cytosol | 23.76 | 30.43 |
| TraesCS2D01G208700.1 | Wheat | cytosol | 25.59 | 29.7 |
| TraesCS3D01G349000.1 | Wheat | cytosol | 24.28 | 29.15 |
| TraesCS4D01G133100.1 | Wheat | cytosol | 23.76 | 29.07 |
| TraesCS2D01G374700.1 | Wheat | cytosol | 24.8 | 27.78 |
| TraesCS5D01G163100.1 | Wheat | cytosol | 23.5 | 26.87 |
| TraesCS1D01G231500.1 | Wheat | peroxisome | 23.5 | 26.32 |
| TraesCS5D01G299500.3 | Wheat | plastid | 24.28 | 24.93 |
| TraesCS3D01G263200.2 | Wheat | mitochondrion | 23.76 | 24.2 |
| TraesCS4D01G051100.1 | Wheat | cytosol, golgi | 19.58 | 23.08 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G051900.2 | EnsemblPlantsGene:TraesCS4D01G051900 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:Hydrolase_4 | InterPro:IPR029058 |
| PANTHER:PTHR11614 | PANTHER:PTHR11614:SF114 | PFAM:PF12146 | SEG:seg | SUPFAM:SSF53474 | TMHMM:TMhelix |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4D:+:27559316..27561514
Molecular Weight (calculated)
41625.7 Da
IEP (calculated)
10.067
GRAVY (calculated)
0.038
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSMQAADA AGRISALLSL LALRRILAVL QPLLLLLLLP FRWRAARQGD AASSAADAVV SASASSGKKA KAAVVLRVPA VCSRRQALAR REAAMRRARE
101: AGRDYELIPT ARGETLFTQS WWPHASSVKP RALVLVMHGL NEHSGRYDHL AKRLNAMDVK VYGMDWTGHG GSDGLHGYVQ SLDLAVQDMK MYLKKISAEN
201: PGVPCFCFGH STGGGIILKA VLDPEVDALV NGIILTSPAV RVQPAHPVVA ALAPVFALIA PRYQFTGSSK NGPAVSRDPE ALRVKYSDPL VFTGSIRVRT
301: GYEILRLTAY LQQHLRRVTV PLLVLHGADD MVTDPEGSRR LHREASTPDK AIRLYDGLLH DLLIEPEKEV VLGDIVDWLS PRI
101: AGRDYELIPT ARGETLFTQS WWPHASSVKP RALVLVMHGL NEHSGRYDHL AKRLNAMDVK VYGMDWTGHG GSDGLHGYVQ SLDLAVQDMK MYLKKISAEN
201: PGVPCFCFGH STGGGIILKA VLDPEVDALV NGIILTSPAV RVQPAHPVVA ALAPVFALIA PRYQFTGSSK NGPAVSRDPE ALRVKYSDPL VFTGSIRVRT
301: GYEILRLTAY LQQHLRRVTV PLLVLHGADD MVTDPEGSRR LHREASTPDK AIRLYDGLLH DLLIEPEKEV VLGDIVDWLS PRI
001: MICSSKGTVV IATRSSFPRL LNRIQNRNDV PISVIATRRS SMSVEAFPMR LKSSQKKRKM NIGCGVSPSS PTTTVVDEEV AIRRKLAMRR VLEDNGGDGS
101: SVRDFSLFTT KRGDTLFTQS WTPVDSAKNR GLVVLLHGLN EHSGRYSDFA KQLNVNGFKV YGIDWIGHGG SDGLHAYVPS LDYAVADLKS FIEKVIAENP
201: GLPCFCIGHS TGGAIILKAM LDAKIEARVS GIVLTSPAVG VQPTYPIFGV IAPFLSFLIP RYQLSAAKKK IMPVSRDPEA LLAKYSDPLV YTGFIRARTG
301: NEILRLGAHL LQNLNRIKVP FLVMHGTADT VTDPKGTQKL YNEASSSDKS IKLYDGLLHD LLFEPERETI AGVILDWLNR RV
101: SVRDFSLFTT KRGDTLFTQS WTPVDSAKNR GLVVLLHGLN EHSGRYSDFA KQLNVNGFKV YGIDWIGHGG SDGLHAYVPS LDYAVADLKS FIEKVIAENP
201: GLPCFCIGHS TGGAIILKAM LDAKIEARVS GIVLTSPAVG VQPTYPIFGV IAPFLSFLIP RYQLSAAKKK IMPVSRDPEA LLAKYSDPLV YTGFIRARTG
301: NEILRLGAHL LQNLNRIKVP FLVMHGTADT VTDPKGTQKL YNEASSSDKS IKLYDGLLHD LLFEPERETI AGVILDWLNR RV
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VYJ0]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.