Factsheet for Solyc03g006560.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400012910	Potato	cytosol	94.56	87.7
VIT_10s0116g00730.t01	Wine grape	cytosol	68.71	64.33
AT1G11090.1	Thale cress	cytosol	66.67	60.49
KRH20516	Soybean	cytosol	66.67	60.49
Bra041073.1-P	Field mustard	cytosol	64.29	58.88
CDY20587	Canola	cytosol	63.95	58.57
CDY20979	Canola	cytosol	63.61	58.07
GSMUA_Achr9P24530_001	Banana	cytosol	52.72	58.05
Zm00001d006611_P001	Maize	cytosol	59.86	52.69
Os07t0565700-01	Rice	cytosol	59.52	52.4
TraesCS2A01G202200.1	Wheat	cytosol	58.84	52.27
TraesCS2B01G229300.1	Wheat	cytosol	58.5	51.96
EER99555	Sorghum	cytosol	59.52	51.78
TraesCS2D01G208700.1	Wheat	cytosol	57.82	51.52
HORVU2Hr1G039890.6	Barley	cytosol, mitochondrion	56.8	45.88
Solyc03g119980.2.1	Tomato	cytosol	41.5	37.31
Solyc05g056000.2.1	Tomato	cytosol	40.14	35.22
Solyc04g010250.2.1	Tomato	cytosol	38.1	35.11
Solyc09g075140.2.1	Tomato	cytosol	39.46	32.95
Solyc02g063160.2.1	Tomato	cytosol	38.1	32.75
Solyc02g086040.1.1	Tomato	cytosol	31.29	32.62
Solyc02g069930.1.1	Tomato	cytosol	35.03	32.29
Solyc05g009390.2.1	Tomato	plastid	35.37	26.2
Solyc02g063200.1.1	Tomato	cytosol	29.59	25.07
Solyc08g066440.2.1	Tomato	cytosol, endoplasmic reticulum, plastid	28.57	20.79
Solyc03g098020.2.1	Tomato	plastid	27.89	20.1

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016298	GO:GO:0016787	GO:GO:0047372
InterPro:Hydrolase_4	InterPro:IPR029058	UniProt:K4BE79	PFAM:PF12146	PANTHER:PTHR11614	PANTHER:PTHR11614:SF20
SUPFAM:SSF53474	EnsemblPlantsGene:Solyc03g006560.2	EnsemblPlants:Solyc03g006560.2.1	UniParc:UPI00027679BF	:	:

Description

No Description!

Coordinates

chr3:+:1128702..1130011

Molecular Weight (calculated)

33230.3 Da

IEP (calculated)

8.452

GRAVY (calculated)

-0.134

Length

294 amino acids

Sequence
(BLAST)

001: MEEEQNKSPL HHYWGNTSEE DYYTLQGIKS TKSFFTSSRD LTLFTRSWLP PTKTPPKGII FMIHGYGNDI SWTFQATPIH LAKKGFACFA LDLEGHGQSQ
101: GLKAYVPNLD LVIDDCLSFF SFVLTQNTEF QDLPKFLFGE SMGGAICVLI HLKRPKEFNG GILIAPMCKI SDKVKPIWPI AQFLTLVARF APTLAVVPTA
201: DLLEKSVKVP EKRIIGGRNP NRYFGKPRLG TVVELLRVTD YVSKVSRELY KLAKSTDKTL KIYDGMMHSL LFGETDENVE IVRGDILAWL NDRC

Best Arabidopsis Sequence Match ( AT1G11090.1 )
(BLAST)

001: MSDQQLETEI NFWGETSEED YFNLKGIIGS KSFFTSPRGL NLFTRSWLPS SSSPPRGLIF MVHGYGNDVS WTFQSTPIFL AQMGFACFAL DIEGHGRSDG
101: VRAYVPSVDL VVDDIISFFN SIKQNPKFQG LPRFLFGESM GGAICLLIQF ADPLGFDGAV LVAPMCKISD KVRPKWPVDQ FLIMISRFLP TWAIVPTEDL
201: LEKSIKVEEK KPIAKRNPMR YNEKPRLGTV MELLRVTDYL GKKLKDVSIP FIIVHGSADA VTDPEVSREL YEHAKSKDKT LKIYDGMMHS MLFGEPDDNI
301: EIVRKDIVSW LNDRCGGDKT KTQV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:O04083]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.