Factsheet for HORVU2Hr1G039890.6

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G202200.1	Wheat	cytosol	84.89	93.35
TraesCS2D01G208700.1	Wheat	cytosol	84.62	93.33
TraesCS2B01G229300.1	Wheat	cytosol	84.34	92.75
Os07t0565700-01	Rice	cytosol	75.0	81.74
EER99555	Sorghum	cytosol	74.45	80.18
Zm00001d006611_P001	Maize	cytosol	73.35	79.94
GSMUA_Achr9P24530_001	Banana	cytosol	50.82	69.29
VIT_10s0116g00730.t01	Wine grape	cytosol	50.27	58.28
PGSC0003DMT400012910	Potato	cytosol	50.0	57.41
Bra041073.1-P	Field mustard	cytosol	50.55	57.32
CDY20979	Canola	cytosol	50.55	57.14
Solyc03g006560.2.1	Tomato	cytosol	45.88	56.8
CDY20587	Canola	cytosol	50.0	56.7
AT1G11090.1	Thale cress	cytosol	50.27	56.48
KRH20516	Soybean	cytosol	49.45	55.56
HORVU5Hr1G049360.1	Barley	cytosol	33.79	41.14
HORVU4Hr1G024280.2	Barley	cytosol	34.62	39.62
HORVU3Hr1G087040.1	Barley	cytosol	16.76	38.85
HORVU1Hr1G058820.2	Barley	peroxisome	35.99	38.76
HORVU5Hr1G049370.7	Barley	mitochondrion	34.89	33.51
HORVU3Hr1G086980.2	Barley	extracellular	15.38	33.33
HORVU2Hr1G090120.10	Barley	plastid	35.16	30.7
HORVU5Hr1G077350.3	Barley	plastid	30.49	29.6
HORVU3Hr1G063840.1	Barley	mitochondrion, plastid	29.67	28.72
HORVU3Hr1G087020.4	Barley	mitochondrion	28.02	28.18
HORVU4Hr1G008550.3	Barley	endoplasmic reticulum, golgi	25.55	24.41
HORVU3Hr1G027160.1	Barley	golgi, mitochondrion	25.0	22.3

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	UniProt:A0A287HS54	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005794	GO:GO:0016787	GO:GO:0047372	EnsemblPlantsGene:HORVU2Hr1G039890	EnsemblPlants:HORVU2Hr1G039890.6	InterPro:Hydrolase_4
InterPro:IPR029058	PFAM:PF12146	PRINTS:PR00111	PANTHER:PTHR11614	PANTHER:PTHR11614:SF20	SUPFAM:SSF53474
UniParc:UPI000B4780C4	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:192200361..192202337

Molecular Weight (calculated)

38600.8 Da

IEP (calculated)

6.376

GRAVY (calculated)

-0.216

Length

364 amino acids

Sequence
(BLAST)

001: RYATGSNDSP TTRRHQFPSP SHPSESPHAP APLTMTQEEA PAPVNFWGEH PATESEYYAA HGAEGESSYF TTPDDAGARR LFTRSWRPAG GGAGAXXXXX
101: XXXXXGYGND ISWTFQATAV FLARSGFACF AADLPGHGRS HGLQAFVPDL EVAVADLLAF FRSVRRREEH AGLPCFLFGE SMGGAICLLI HLRTSPEEWA
201: GAVLVAPMCR ISDRIRPRWP VPEILTLVSR FAPTLPIVPT ADLIEKSVKV PAKRLIAARN PMRYNGRPRL GTVMELLRAT DELGARLGEI TIPFLVVHGS
301: ADEVTDPAVS RALHEAAASE DKTIKMYDGM LHSMLFGEPE ENIERVRGDI LAWLSERCTP TSTS

Best Arabidopsis Sequence Match ( AT1G11090.1 )
(BLAST)

001: MSDQQLETEI NFWGETSEED YFNLKGIIGS KSFFTSPRGL NLFTRSWLPS SSSPPRGLIF MVHGYGNDVS WTFQSTPIFL AQMGFACFAL DIEGHGRSDG
101: VRAYVPSVDL VVDDIISFFN SIKQNPKFQG LPRFLFGESM GGAICLLIQF ADPLGFDGAV LVAPMCKISD KVRPKWPVDQ FLIMISRFLP TWAIVPTEDL
201: LEKSIKVEEK KPIAKRNPMR YNEKPRLGTV MELLRVTDYL GKKLKDVSIP FIIVHGSADA VTDPEVSREL YEHAKSKDKT LKIYDGMMHS MLFGEPDDNI
301: EIVRKDIVSW LNDRCGGDKT KTQV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:O04083]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.