Factsheet for PGSC0003DMT400012910

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g006560.2.1	Tomato	cytosol	87.7	94.56
VIT_10s0116g00730.t01	Wine grape	cytosol	69.09	69.75
AT1G11090.1	Thale cress	cytosol	69.09	67.59
Bra041073.1-P	Field mustard	cytosol	67.51	66.67
KRH20516	Soybean	cytosol	68.14	66.67
CDY20587	Canola	cytosol	67.19	66.36
CDY20979	Canola	cytosol	66.88	65.84
GSMUA_Achr9P24530_001	Banana	cytosol	53.94	64.04
TraesCS2A01G202200.1	Wheat	cytosol	59.94	57.4
Zm00001d006611_P001	Maize	cytosol	60.25	57.19
Os07t0565700-01	Rice	cytosol	60.25	57.19
TraesCS2B01G229300.1	Wheat	cytosol	59.62	57.1
EER99555	Sorghum	cytosol	60.57	56.8
TraesCS2D01G208700.1	Wheat	cytosol	58.99	56.67
HORVU2Hr1G039890.6	Barley	cytosol, mitochondrion	57.41	50.0
PGSC0003DMT400062139	Potato	cytosol	31.23	43.61
PGSC0003DMT400014303	Potato	cytosol	41.96	40.67
PGSC0003DMT400077598	Potato	cytosol	38.8	38.56
PGSC0003DMT400060321	Potato	cytosol	40.38	38.21
PGSC0003DMT400081375	Potato	cytosol	42.27	38.07
PGSC0003DMT400067900	Potato	cytosol	40.38	37.32
PGSC0003DMT400026999	Potato	cytosol	38.8	35.96
PGSC0003DMT400054412	Potato	cytosol	35.33	35.11
PGSC0003DMT400037702	Potato	cytosol	36.59	29.22
PGSC0003DMT400011430	Potato	cytosol	31.55	24.75
PGSC0003DMT400083974	Potato	plastid	31.23	24.26

Protein Annotations

EntrezGene:102605828	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005794	GO:GO:0016787	GO:GO:0047372	InterPro:Hydrolase_4	InterPro:IPR029058	UniProt:M1A202
PFAM:PF12146	EnsemblPlantsGene:PGSC0003DMG400005031	PGSC:PGSC0003DMG400005031	EnsemblPlants:PGSC0003DMT400012910	PRINTS:PR00111	PANTHER:PTHR11614
PANTHER:PTHR11614:SF20	SUPFAM:SSF53474	UniParc:UPI000296DE76	RefSeq:XP_006343251.1	RefSeq:XP_006343252.1	:

Description

Hydrolase, alpha/beta fold family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400005031]

Coordinates

chr3:+:2064581..2067645

Molecular Weight (calculated)

35621.3 Da

IEP (calculated)

7.150

GRAVY (calculated)

-0.077

Length

317 amino acids

Sequence
(BLAST)

001: MEEEQNKSPL LHYWGNTPEE DYYTLQGIKS TKSFFTSPRG LTLFTRSWLP PTKTPPKGII FMVHGYGNDT SWTFQATPIH LAKKGFACFA LDLEGHGQSQ
101: GLKAYVPNLD LVIDDCLSFF NFVLTQNPEF QDLPKFLFGE SMGGAICLLI HFIRPKEFNG GILIAPMCKI SDKVKPIWPV AQFLTLVARF APTLAVVPTT
201: DLLEKSVKVP EKRIIGGRNP NRYVGKPRLG TVLELLRVTD YVSSKLCDVN MPFLVLHGSA DVVTDPEVSR ELYKLAKSTD KTLKIYDGMM HSLLFGETDE
301: NVEIVRGDIL AWLNDRC

Best Arabidopsis Sequence Match ( AT1G11090.1 )
(BLAST)

001: MSDQQLETEI NFWGETSEED YFNLKGIIGS KSFFTSPRGL NLFTRSWLPS SSSPPRGLIF MVHGYGNDVS WTFQSTPIFL AQMGFACFAL DIEGHGRSDG
101: VRAYVPSVDL VVDDIISFFN SIKQNPKFQG LPRFLFGESM GGAICLLIQF ADPLGFDGAV LVAPMCKISD KVRPKWPVDQ FLIMISRFLP TWAIVPTEDL
201: LEKSIKVEEK KPIAKRNPMR YNEKPRLGTV MELLRVTDYL GKKLKDVSIP FIIVHGSADA VTDPEVSREL YEHAKSKDKT LKIYDGMMHS MLFGEPDDNI
301: EIVRKDIVSW LNDRCGGDKT KTQV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:O04083]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.