CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0116g00730.t01	Wine grape	cytosol	70.99	73.25
PGSC0003DMT400012910	Potato	cytosol	66.67	68.14
Solyc03g006560.2.1	Tomato	cytosol	60.49	66.67
CDY20587	Canola	cytosol	63.58	64.17
GSMUA_Achr9P24530_001	Banana	cytosol	52.47	63.67
CDY20979	Canola	cytosol	63.27	63.66
Bra041073.1-P	Field mustard	cytosol	62.96	63.55
AT1G11090.1	Thale cress	cytosol	62.35	62.35
TraesCS2A01G202200.1	Wheat	cytosol	59.26	58.01
TraesCS2B01G229300.1	Wheat	cytosol	58.64	57.4
TraesCS2D01G208700.1	Wheat	cytosol	58.02	56.97
Os07t0565700-01	Rice	cytosol	58.64	56.89
Zm00001d006611_P001	Maize	cytosol	58.33	56.59
EER99555	Sorghum	cytosol	57.72	55.33
HORVU2Hr1G039890.6	Barley	cytosol, mitochondrion	55.56	49.45
KRG93887	Soybean	cytosol	25.31	41.21
KRG92965	Soybean	cytosol	37.96	37.61
KRH34878	Soybean	cytosol	37.65	37.54
KRH02768	Soybean	cytosol	33.02	37.28
KRH48488	Soybean	cytosol	25.62	37.22
KRH36216	Soybean	nucleus	39.51	36.89
KRH68197	Soybean	cytosol	39.51	36.78
KRH19112	Soybean	cytosol	36.73	36.5
KRH69290	Soybean	cytosol	34.88	36.33
KRH18244	Soybean	cytosol	36.73	34.49
KRH39013	Soybean	cytosol, mitochondrion, peroxisome, plastid	17.59	32.57
KRH60583	Soybean	peroxisome	28.4	32.39
KRH39183	Soybean	cytosol	35.19	32.2
KRH75362	Soybean	nucleus	33.95	27.92
KRG90831	Soybean	plastid	33.02	27.02
KRH41883	Soybean	endoplasmic reticulum, golgi	29.94	26.94
KRH35942	Soybean	plastid	31.17	26.37
KRH48707	Soybean	endoplasmic reticulum, golgi	29.32	25.13
KRH52771	Soybean	cytosol, endoplasmic reticulum, peroxisome	26.54	23.56
KRH62086	Soybean	plastid	27.16	23.28

Protein Annotations

EntrezGene:100793956	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	EMBL:ACUP02008274	EMBL:BT098969
UniProt:C6TML4	EnsemblPlantsGene:GLYMA_13G183800	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016298	GO:GO:0016787	GO:GO:0047372	InterPro:Hydrolase_4
InterPro:IPR029058	EnsemblPlants:KRH20516	ProteinID:KRH20516	ProteinID:KRH20516.1	PFAM:PF12146	PANTHER:PTHR11614
PANTHER:PTHR11614:SF20	SUPFAM:SSF53474	UniParc:UPI00018C65E1	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:29740765..29742788

Molecular Weight (calculated)

36921.4 Da

IEP (calculated)

6.851

GRAVY (calculated)

-0.210

Length

324 amino acids

Sequence
(BLAST)

001: MEEEKEDQKL LTYPHYWGFT PEEDYYKQQG ITSTSSFFTT PQGLKLFTRS WLPNPNTPPR ALIFMVHGYG NDISWTFQST PIFLAQNSFS CFALDLQGHG
101: HSQGLKAYVP NVHLAAHDCL SFFNSIRTQN PNLPSFLYGE SMGAAISLLI HLVNSETEPK SQPFQGAVLV APMCKISDNV RPKWPIPQIL TFLSRFFPTL
201: PIVPTPDLLY KSVKVDHKKV IADMNPLRYR GKPRLGTVVE LLRVTDLLSR RLCDVSLPFI VLHGSADVVT DPNVSRELYR EARSDDKTIK VYEEMMHSLL
301: FGETDENVEI VRNDILEWLV ARCK

Best Arabidopsis Sequence Match ( AT1G11090.1 )
(BLAST)

001: MSDQQLETEI NFWGETSEED YFNLKGIIGS KSFFTSPRGL NLFTRSWLPS SSSPPRGLIF MVHGYGNDVS WTFQSTPIFL AQMGFACFAL DIEGHGRSDG
101: VRAYVPSVDL VVDDIISFFN SIKQNPKFQG LPRFLFGESM GGAICLLIQF ADPLGFDGAV LVAPMCKISD KVRPKWPVDQ FLIMISRFLP TWAIVPTEDL
201: LEKSIKVEEK KPIAKRNPMR YNEKPRLGTV MELLRVTDYL GKKLKDVSIP FIIVHGSADA VTDPEVSREL YEHAKSKDKT LKIYDGMMHS MLFGEPDDNI
301: EIVRKDIVSW LNDRCGGDKT KTQV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:O04083]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.