CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008644.1-P	Field mustard	cytosol	91.69	100.0
CDY26499	Canola	mitochondrion	93.63	90.37
AT5G16120.4	Thale cress	mitochondrion	81.72	77.02
PGSC0003DMT400062139	Potato	cytosol	45.98	73.13
KRG93887	Soybean	cytosol	39.61	71.86
Solyc02g063160.2.1	Tomato	cytosol	63.71	67.25
KRH18244	Soybean	cytosol	63.99	66.96
PGSC0003DMT400026999	Potato	cytosol	61.77	65.2
GSMUA_AchrUn_...	Banana	cytosol	59.83	62.97
VIT_14s0006g02900.t01	Wine grape	plastid	64.54	60.52
PGSC0003DMT400067900	Potato	cytosol	56.79	59.77
Solyc02g086040.1.1	Tomato	cytosol	44.88	57.45
TraesCS5B01G291500.2	Wheat	plastid	59.0	57.1
Os10t0135600-01	Rice	plastid	58.17	56.91
TraesCS5A01G292100.1	Wheat	plastid	58.73	56.84
TraesCS5D01G299500.3	Wheat	plastid	58.73	56.84
GSMUA_Achr9P21380_001	Banana	cytosol	53.74	56.73
HORVU5Hr1G077350.3	Barley	plastid	58.45	56.27
OQU91987	Sorghum	cytosol	57.34	54.19
CDX79202	Canola	cytosol	25.21	50.84
Zm00001d030256_P004	Maize	plastid	57.89	50.48
CDY38132	Canola	mitochondrion	83.93	50.08
CDX85514	Canola	cytosol	83.38	48.86
Solyc02g063200.1.1	Tomato	cytosol	45.98	47.84
CDY40888	Canola	plastid	50.14	47.38
CDY40890	Canola	plastid	49.86	47.0
CDY38348	Canola	plastid	49.86	47.0
CDY24963	Canola	cytosol	37.12	42.14
CDX93264	Canola	cytosol	36.84	41.82
CDY07006	Canola	cytosol	35.73	41.48
CDX68059	Canola	cytosol	21.61	41.05
CDY07008	Canola	cytosol	36.01	40.88
CDY72172	Canola	cytosol	17.73	40.76
CDX73397	Canola	cytosol	34.07	40.46
CDY40205	Canola	cytosol	34.07	40.46
CDX95729	Canola	cytosol	37.95	39.48
CDX83323	Canola	cytosol	37.95	39.48
CDX76667	Canola	cytosol	36.84	39.35
CDY07007	Canola	cytosol	24.65	39.21
CDY20979	Canola	cytosol	34.9	39.13
CDY20587	Canola	cytosol	34.63	38.94
CDX93957	Canola	cytosol	32.41	38.87
CDY07651	Canola	cytosol	37.95	37.95
CDY55538	Canola	cytosol	36.57	37.93
CDY27476	Canola	cytosol	36.01	37.46
CDX89152	Canola	mitochondrion	37.12	36.12
CDX76116	Canola	cytosol	31.58	32.95
CDY11452	Canola	cytosol	32.96	31.32
CDY02917	Canola	cytosol, endoplasmic reticulum, vacuole	31.3	30.71
CDY62199	Canola	cytosol	26.59	29.27
CDY72184	Canola	cytosol	26.59	29.27
CDX85571	Canola	plastid	25.76	28.35
CDY62163	Canola	plastid	16.62	27.52
CDY13986	Canola	cytosol	25.48	27.46
CDX92543	Canola	cytosol	25.48	27.14
CDY69863	Canola	cytosol	24.93	26.87
CDY44908	Canola	cytosol	24.65	26.57
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	26.04	24.1
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	26.04	24.1
CDX83852	Canola	plastid	24.1	22.96
CDX96478	Canola	plastid	22.99	22.93
CDX96722	Canola	plastid	24.1	22.42
CDX72991	Canola	plastid	24.93	22.11
CDX93265	Canola	cytosol	35.73	21.39
CDX68225	Canola	mitochondrion	27.15	21.08
CDY11104	Canola	plastid	26.59	20.78

Protein Annotations

EnsemblPlants:CDX69469	EnsemblPlantsGene:GSBRNA2T00135453001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF86	PFAM:PF12146	PRINTS:PR00111	ProteinID:CDX69469
ProteinID:CDX69469.1	SUPFAM:SSF53474	UniParc:UPI0004EEA4CD	MapMan:35.1	:	:

Description

BnaA10g18180D

Coordinates

chrLK031790:-:371233..373271

Molecular Weight (calculated)

40813.4 Da

IEP (calculated)

7.396

GRAVY (calculated)

-0.219

Length

361 amino acids

Sequence
(BLAST)

001: MALRSAKLFL FSPLHGFADK GRPVWQRKSS MAELDNEELR RLKDVNMDEA PARRHVRDCF RDIQHNLDHI LIKTPGDGIK TKESYEVNSR GFEIFSKSWL
101: PESSRPRALV CFCHGIARRL ALSGYGVFAM DYPGFGLSEG LHGYISSFDL LVEDVIEHYS NIKEKPEFSS LPSFLFGQSM GGAVSLKIHF KQPNAWTGAV
201: LVAPMCKIAE DMVPPPVLKH ILIGLSSVLP KHKLVPQKDL TDAAFRDVTK RKLAPYNVIC YCDKPRLRTA VEMLRTTQEI EQQLHKVCLP ILILHGEADR
301: MTDPSVSRDL YEKAKSSDKK IVLYKDAYHS LLEGEPDEVI LLVLSDIISW LDDHSLQVEG S

Best Arabidopsis Sequence Match ( AT5G16120.4 )
(BLAST)

001: MALRSATKLT LFSPLHGFVD KGRRSLWQRR KSMAPTATLD NNEELRRLRE VNIDEAPGRR RVRDSLKDIQ LNLDHILFKT PENGIKTKES FEVNSRGVEI
101: FSKSWLPEAS KPRALVCFCH GYGDTCTFFF EGIARRLALS GYGVFAMDYP GFGLSEGLHG YIPSFDLLVQ DVIEHYSNIK ANPEFSSLPS FLFGQSMGGA
201: VSLKIHLKQP NAWAGAVLLA PMCKIADDLV PPPVLKQILI GLANVLPKHK LVPQKDLAEA GFRDIRKRDM TPYNMICYSG KPRLRTAVEM LRTTQDIEKQ
301: LQEVSLPILI LHGEADTVTD PSVSRELYEK AKSPDKKIVL YENAYHSLLE GEPDDMILRV LSDIISWLND HSLQAEGSSV TTM

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G16120]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.