CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40205	Canola	cytosol	99.01	99.01
Bra007148.1-P	Field mustard	cytosol	94.41	98.97
AT3G55180.1	Thale cress	cytosol	86.18	83.97
CDY07006	Canola	cytosol	76.32	74.6
CDY72172	Canola	cytosol	36.18	70.06
CDY24963	Canola	cytosol	71.38	68.24
CDY07008	Canola	cytosol	71.05	67.92
CDX93264	Canola	cytosol	71.05	67.92
CDY07007	Canola	cytosol	48.68	65.2
CDY07651	Canola	cytosol	72.37	60.94
PGSC0003DMT400077598	Potato	cytosol	63.49	60.5
Solyc04g010250.2.1	Tomato	cytosol	63.16	60.19
KRG92965	Soybean	cytosol	61.84	57.49
VIT_00s0317g00110.t01	Wine grape	cytosol	59.54	56.74
Os01t0837200-01	Rice	cytosol	22.04	56.3
KRH36216	Soybean	nucleus	63.49	55.62
EES03847	Sorghum	cytosol	55.59	54.69
Zm00001d042944_P001	Maize	cytosol	54.93	54.05
HORVU3Hr1G087040.1	Barley	cytosol	27.3	52.87
Zm00001d012434_P001	Maize	cytosol	17.11	52.53
TraesCS3A01G355000.1	Wheat	cytosol	48.68	52.3
TraesCS3B01G388000.1	Wheat	cytosol	50.66	51.51
TraesCS3A01G355100.1	Wheat	cytosol	50.66	51.51
TraesCS3D01G349100.1	Wheat	cytosol	50.33	51.17
TraesCS3D01G349000.1	Wheat	cytosol	53.62	51.1
CDX76116	Canola	cytosol	56.25	49.42
OQU87824	Sorghum	cytosol	47.04	47.51
CDX83323	Canola	cytosol	53.62	46.97
CDX95729	Canola	cytosol	53.29	46.69
CDX76667	Canola	cytosol	51.32	46.15
GSMUA_Achr6P34380_001	Banana	cytosol	52.3	46.09
CDY02917	Canola	cytosol, endoplasmic reticulum, vacuole	55.59	45.92
CDY27476	Canola	cytosol	51.32	44.96
CDY55538	Canola	cytosol	50.99	44.54
CDX93957	Canola	cytosol	43.75	44.19
HORVU3Hr1G086980.2	Barley	extracellular	24.34	44.05
CDX89152	Canola	mitochondrion	51.97	42.59
HORVU3Hr1G087020.4	Barley	mitochondrion	50.66	42.54
CDY20587	Canola	cytosol	41.12	38.94
CDY20979	Canola	cytosol	40.46	38.2
CDY11452	Canola	cytosol	47.04	37.63
CDX79202	Canola	cytosol	22.04	37.43
CDX93265	Canola	cytosol	71.71	36.15
CDX69469	Canola	mitochondrion	40.46	34.07
CDX85571	Canola	plastid	34.54	32.01
CDY26499	Canola	mitochondrion	39.14	31.82
CDX68059	Canola	cytosol	19.74	31.58
CDY69863	Canola	cytosol	34.21	31.04
CDY44908	Canola	cytosol	33.88	30.75
CDY72184	Canola	cytosol	32.57	30.18
CDY62199	Canola	cytosol	32.57	30.18
CDY13986	Canola	cytosol	32.57	29.55
CDX92543	Canola	cytosol	32.57	29.2
CDY40888	Canola	plastid	35.86	28.53
CDY40890	Canola	plastid	35.86	28.46
CDY38348	Canola	plastid	35.86	28.46
CDY62163	Canola	plastid	19.74	27.52
CDX96478	Canola	plastid	28.29	23.76
CDX83852	Canola	plastid	29.28	23.48
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	29.93	23.33
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	29.61	23.08
CDX96722	Canola	plastid	28.95	22.68
CDX72991	Canola	plastid	29.28	21.87
CDX68225	Canola	mitochondrion	30.59	20.0
CDY11104	Canola	plastid	30.26	19.91
CDX85514	Canola	cytosol	40.13	19.81
CDY38132	Canola	mitochondrion	39.14	19.67

Protein Annotations

EnsemblPlants:CDX73397	EnsemblPlantsGene:GSBRNA2T00108876001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF92	PFAM:PF12146	PRINTS:PR00111	ProteinID:CDX73397
ProteinID:CDX73397.1	SUPFAM:SSF53474	UniParc:UPI0004EBD347	MapMan:5.7.1.1	:	:

Description

BnaC08g26060D

Coordinates

chrLK031799:-:129876..132479

Molecular Weight (calculated)

34594.8 Da

IEP (calculated)

7.101

GRAVY (calculated)

-0.294

Length

304 amino acids

Sequence
(BLAST)

001: MVKYGEDYVL NSRGMKLFTC SWRPEEQQEP KAMIFLCHGY GMESSITMNS TAIRLVNAGF VVYGIDYEGH GKSGGLNGYI QNFDHLVDDV SSHFSSICDK
101: EENKGKMRFL MGESMGGAVV LLLARKKPEF WDGAVLVAPM CKLAEEIKPH PMVIKFLTKL TRVIPTWKIV PSNDIIDVAF KESHIRKQVR ENEYCYKGRP
201: RLKTAHQLLT TSLDLEKNLH QVAMPFIVLH GEDDKVTDKD VSKLLYEVSS SSDKTFKLYP NMWHGLLYGE SPQNLEIVFG DIIGWLNERA SVTNQRIETE
301: LKHA

Best Arabidopsis Sequence Match ( AT3G55180.1 )
(BLAST)

001: MVMYKEDYVS NSRGIQLFTC SWKQEEQQEP KALIFLCHGY AMESSITMSS TAVRLANAGF SVYGMDYEGH GKSGGLNGYV KKFDDLVQDV SSHYSSICEL
101: EENKGKMRFL MGESMGGAVV LLLERKKPNF WDGAVLVAPM CKLAEDIKPH PMVISFLTKL TRFIPTWKIV PSNDIIDVAF KETHIRKQVR DNEYCYKGRP
201: RLKTAHQLLM VSLDLEKNLD QVSMPFIVLH GEDDKVTDKN VSKLLYEVAS SSDKTFKLYP NMWHGLLYGE SPENLEIVFS DIISWLKERA SVTNQKLETE
301: LKHVDDGFSM QK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M3D1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.