CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85514	Canola	cytosol	97.52	95.78
Bra023553.1-P	Field mustard	cytosol	87.6	95.67
CDX69469	Canola	mitochondrion	50.08	83.93
AT5G16120.4	Thale cress	mitochondrion	52.4	82.77
CDY26499	Canola	mitochondrion	49.59	80.21
PGSC0003DMT400062139	Potato	cytosol	28.1	74.89
KRG93887	Soybean	cytosol	24.63	74.87
Solyc02g063160.2.1	Tomato	cytosol	38.68	68.42
KRH18244	Soybean	cytosol	38.84	68.12
PGSC0003DMT400026999	Potato	cytosol	37.19	65.79
GSMUA_AchrUn_...	Banana	cytosol	37.02	65.31
VIT_14s0006g02900.t01	Wine grape	plastid	39.83	62.6
PGSC0003DMT400067900	Potato	cytosol	34.55	60.93
Os10t0135600-01	Rice	plastid	36.86	60.43
TraesCS5B01G291500.2	Wheat	plastid	36.86	59.79
TraesCS5A01G292100.1	Wheat	plastid	36.53	59.25
TraesCS5D01G299500.3	Wheat	plastid	36.53	59.25
OQU91987	Sorghum	cytosol	37.36	59.16
GSMUA_Achr9P21380_001	Banana	cytosol	33.39	59.06
HORVU5Hr1G077350.3	Barley	plastid	36.53	58.93
Solyc02g086040.1.1	Tomato	cytosol	26.45	56.74
Zm00001d030256_P004	Maize	plastid	37.02	54.11
CDX79202	Canola	cytosol	14.38	48.6
Solyc02g063200.1.1	Tomato	cytosol	27.27	47.55
CDY40888	Canola	plastid	29.92	47.38
CDY40890	Canola	plastid	29.75	47.0
CDY38348	Canola	plastid	29.75	47.0
CDY24963	Canola	cytosol	22.64	43.08
CDX93264	Canola	cytosol	22.48	42.77
CDX68059	Canola	cytosol	13.22	42.11
CDY07008	Canola	cytosol	21.82	41.51
CDX76667	Canola	cytosol	22.81	40.83
CDY72172	Canola	cytosol	10.58	40.76
CDY07006	Canola	cytosol	20.66	40.19
CDY07007	Canola	cytosol	15.04	40.09
CDY20979	Canola	cytosol	21.16	39.75
CDY20587	Canola	cytosol	20.99	39.56
CDX83323	Canola	cytosol	22.64	39.48
CDX95729	Canola	cytosol	22.64	39.48
CDX93957	Canola	cytosol	19.5	39.2
CDY40205	Canola	cytosol	19.67	39.14
CDX73397	Canola	cytosol	19.67	39.14
CDY07651	Canola	cytosol	23.14	38.78
CDY55538	Canola	cytosol	22.15	38.51
CDY27476	Canola	cytosol	21.65	37.75
CDX89152	Canola	mitochondrion	22.81	37.2
CDX76116	Canola	cytosol	19.01	33.24
CDY11452	Canola	cytosol	19.83	31.58
CDX85571	Canola	plastid	16.69	30.79
CDY02917	Canola	cytosol, endoplasmic reticulum, vacuole	18.68	30.71
CDY62199	Canola	cytosol	15.7	28.96
CDY72184	Canola	cytosol	15.7	28.96
CDY13986	Canola	cytosol	16.03	28.96
CDX92543	Canola	cytosol	16.2	28.91
CDY69863	Canola	cytosol	15.7	28.36
CDY44908	Canola	cytosol	15.54	28.06
CDY62163	Canola	plastid	9.92	27.52
CDX96478	Canola	plastid	14.71	24.59
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	15.7	24.36
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	15.7	24.36
CDX83852	Canola	plastid	15.04	24.01
CDX96722	Canola	plastid	15.04	23.45
CDX72991	Canola	plastid	15.54	23.1
CDX68225	Canola	mitochondrion	16.86	21.94
CDY11104	Canola	plastid	16.69	21.86
CDX93265	Canola	cytosol	20.83	20.9

Protein Annotations

MapMan:17.1.3.1.8	Gene3D:3.40.50.1820	GO:A0A078HJU4	UniProt:A0A078HJU4	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
EnsemblPlants:CDY38132	ProteinID:CDY38132	ProteinID:CDY38132.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00065415001	InterPro:Hydrolase_4	InterPro:IPR029058	PFAM:PF01251	PFAM:PF12146	PRINTS:PR00111
ScanProsite:PS00948	PANTHER:PTHR11614	PANTHER:PTHR11614:SF86	InterPro:Ribosomal_S7e	SUPFAM:SSF53474	UniParc:UPI0004EEA5B4
SEG:seg	:	:	:	:	:

Description

BnaC02g06410DBnaC02g06410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJU4]

Coordinates

chrLK032416:-:280605..284253

Molecular Weight (calculated)

69025.9 Da

IEP (calculated)

9.733

GRAVY (calculated)

-0.314

Length

605 amino acids

Sequence
(BLAST)

001: MMALRSAKLL LFSPLHENHW PPLTFIHKGR RTEWPRKRSM ATTAKVDTDD LRRFKDVNLD EAPSRRHVRD SLKDTQLNLD HILFKTPGDG IKTKESYEVN
101: SRGVEIFSKS WLPEASSPRA LVCFCHDPFL TGIARRLALS GYGVFAMDYP GFGLSQGLHG FIPSFDLLVE DVIEHYSNIK DNPEFSSLPS FLFGQSMGGA
201: VSLKIHFKQP IAWTGAVLVA PMCKIADDMV PPPVLKQILI GLANVLPKHK LVPQKDLAEA AFRDVRKRNM TQYNVICYSG KPRLRTAVEM LRTTQEIEQQ
301: LEKVSLPILI LHGEADTVTD PSVSRELYQK AKSSDKKIVL YKDAYHSLLE GEPDEMILRV LADIISWLDD HSSQAEGSLV TPPMRSRKLL LSLFFNLELF
401: FFFVPADFSL YDSVKMFSAQ NKIKKDKNAA PTECEEQVAQ ALFDLENTNQ ELKSELKDLY INQAVNMDIA GNRKAIVIYV PFRLRKAFRK IHPRLVRELE
501: KKFSGKDVIF VATRRIMRPP KKGAAVQRPR NRTLTSVHEA MLEDVAYPAE IVGKRTRYRL DGSKIMKVYL EAKERNNTEY KLESMMGVYR KLTGKDVTFE
601: YPVEA

Best Arabidopsis Sequence Match ( AT5G16120.4 )
(BLAST)

001: MALRSATKLT LFSPLHGFVD KGRRSLWQRR KSMAPTATLD NNEELRRLRE VNIDEAPGRR RVRDSLKDIQ LNLDHILFKT PENGIKTKES FEVNSRGVEI
101: FSKSWLPEAS KPRALVCFCH GYGDTCTFFF EGIARRLALS GYGVFAMDYP GFGLSEGLHG YIPSFDLLVQ DVIEHYSNIK ANPEFSSLPS FLFGQSMGGA
201: VSLKIHLKQP NAWAGAVLLA PMCKIADDLV PPPVLKQILI GLANVLPKHK LVPQKDLAEA GFRDIRKRDM TPYNMICYSG KPRLRTAVEM LRTTQDIEKQ
301: LQEVSLPILI LHGEADTVTD PSVSRELYEK AKSPDKKIVL YENAYHSLLE GEPDDMILRV LSDIISWLND HSLQAEGSSV TTM

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G16120]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.