CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40509	Soybean	cytosol	96.11	96.11
KRH15982	Soybean	cytosol	19.87	78.63
VIT_11s0016g00030.t01	Wine grape	cytosol	50.54	78.0
GSMUA_Achr8P02460_001	Banana	cytosol, nucleus	4.75	75.86
VIT_15s0046g03730.t01	Wine grape	cytosol	76.24	75.75
CDY07210	Canola	mitochondrion	71.06	69.12
GSMUA_AchrUn_...	Banana	cytosol	70.41	69.07
PGSC0003DMT400000445	Potato	endoplasmic reticulum	68.68	68.83
AT4G00550.1	Thale cress	cytosol	70.19	68.71
CDY51152	Canola	mitochondrion, plastid	70.84	68.33
PGSC0003DMT400026609	Potato	cytosol	68.03	68.33
Bra037346.1-P	Field mustard	mitochondrion, plastid	70.41	67.78
Solyc10g017580.2.1	Tomato	cytosol	66.95	67.25
GSMUA_Achr10P...	Banana	cytosol	67.39	66.38
Solyc01g094170.2.1	Tomato	cytosol	60.26	66.27
GSMUA_Achr9P03500_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	66.74	65.88
Os03t0214400-01	Rice	plasma membrane	66.31	64.5
EER92641	Sorghum	golgi	65.87	64.21
Os03t0268300-01	Rice	golgi	64.15	64.15
Zm00001d028211_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	65.44	63.79
EER92494	Sorghum	golgi	63.71	63.58
TraesCS4D01G246000.1	Wheat	mitochondrion	64.58	62.82
TraesCS4B01G246700.1	Wheat	mitochondrion	64.58	62.82
HORVU4Hr1G067920.1	Barley	mitochondrion	64.15	62.4
Zm00001d028571_P001	Maize	golgi	63.71	62.11
VIT_07s0141g01080.t01	Wine grape	cytosol	14.9	61.61
TraesCS4D01G211200.1	Wheat	mitochondrion	64.36	59.72
TraesCS4A01G093900.1	Wheat	mitochondrion	64.15	59.52
TraesCS4B01G210400.1	Wheat	mitochondrion	64.15	59.52
TraesCS4A01G058200.1	Wheat	cytosol	65.44	59.3
HORVU4Hr1G060440.2	Barley	mitochondrion	63.93	59.2
GSMUA_Achr8P02450_001	Banana	cytosol	19.65	56.17
KRH75753	Soybean	mitochondrion	17.49	52.6
KRH68005	Soybean	nucleus	54.64	32.31
KRG96264	Soybean	nucleus	54.64	32.15
KRH49694	Soybean	mitochondrion	28.73	24.49

Protein Annotations

Gene3D:3.40.50.2000	MapMan:5.3.3	EntrezGene:547762	UniProt:A0A0R0F2Z2	EMBL:AY635908	ncoils:Coil
EnsemblPlantsGene:GLYMA_18G228900	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009527	GO:GO:0009536	GO:GO:0009707	GO:GO:0009877	GO:GO:0009987	GO:GO:0016020
GO:GO:0016740	GO:GO:0016757	GO:GO:0019375	GO:GO:0035250	GO:GO:0043661	GO:GO:0046481
InterPro:Glyco_trans_1	EnsemblPlants:KRH00685	ProteinID:KRH00685	ProteinID:KRH00685.1	PFAM:PF00534	PANTHER:PTHR12526
PANTHER:PTHR12526:SF460	UniProt:Q6DW75	SUPFAM:SSF53756	UniParc:UPI00003BEDA6	SEG:seg	:

Description

DGD2hypothetical protein

Coordinates

chr18:-:51811174..51816178

Molecular Weight (calculated)

52565.7 Da

IEP (calculated)

7.286

GRAVY (calculated)

-0.352

Length

463 amino acids

Sequence
(BLAST)

001: MDKKEHIAIF TTASLPWLTG TAVNPLFRAA YLAKSGERDV TLVIPWLSLK DQRLVYPNNI TFASPSEHEK YICQWLEERV GFTSGFSIQF YPGKFSRDKR
101: SILAVGDISE IIPDKVADIA VLEEPEHLTW YHHGKRWKTK FRLVIGIIHT NYLEYVKREK NGVMQAFLLK YLNNWVVSIY CHKVIRLSAA TQDYTGSIIC
201: NVHGVNPKFL EIGKKKREQQ QKGEHAFTKG AYFIGKMIWS KGYKELLQLL KDHEKELSAL EVDLFGSGED SDEVQKAAEK LELAVRVHPA RDHADALFHD
301: YKLFLNPSTT DVVCTTTAEA LAMGKIVVCA NHPSNDFFKQ FPNCWTYDDD DGFVKLTLKA LAEQPAQPTD AQRHDLSWEA ATKRFLKAAD LDKPLERKLS
401: RTTSNFLAAS LNLQEKVDEA SAYVHHVASG FEVSRRIFGA IPDSLQPDEE LRKELGLTDA STK

Best Arabidopsis Sequence Match ( AT4G00550.2 )
(BLAST)

001: MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD

Arabidopsis Description

DGD2Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W1S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.