Factsheet for Os03t0214400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 3
mitochondrion 4
plastid 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G246700.1	Wheat	mitochondrion	83.61	83.61
EER92641	Sorghum	golgi	83.4	83.58
HORVU4Hr1G067920.1	Barley	mitochondrion	83.4	83.4
Zm00001d028211_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	83.19	83.37
TraesCS4D01G246000.1	Wheat	mitochondrion	82.98	82.98
TraesCS4A01G058200.1	Wheat	cytosol	83.4	77.69
GSMUA_AchrUn_...	Banana	cytosol	69.75	70.34
VIT_11s0016g00030.t01	Wine grape	cytosol	43.28	68.67
KRH40509	Soybean	cytosol	65.13	66.95
KRH00685	Soybean	cytosol	64.5	66.31
Os03t0268300-01	Rice	golgi	64.29	66.09
VIT_15s0046g03730.t01	Wine grape	cytosol	63.66	65.02
CDY07210	Canola	mitochondrion	63.66	63.66
CDY51152	Canola	mitochondrion, plastid	64.08	63.54
AT4G00550.1	Thale cress	cytosol	63.03	63.42
Bra037346.1-P	Field mustard	mitochondrion, plastid	63.87	63.2
PGSC0003DMT400000445	Potato	endoplasmic reticulum	59.66	61.47
PGSC0003DMT400026609	Potato	cytosol	58.61	60.52
Solyc10g017580.2.1	Tomato	cytosol	57.77	59.65
Solyc01g094170.2.1	Tomato	cytosol	52.52	59.38
KRH15982	Soybean	cytosol	14.5	58.97
VIT_07s0141g01080.t01	Wine grape	cytosol	11.55	49.11
Os11t0158400-01	Rice	cytosol	53.99	34.92
Os02t0539100-01	Rice	cytosol, mitochondrion, nucleus	53.78	31.92
Os04t0416900-01	Rice	cytosol, mitochondrion	3.57	22.08
Os11t0158300-01	Rice	mitochondrion	7.98	19.49

Protein Annotations

Gene3D:3.40.50.2000	EntrezGene:4332054	MapMan:5.3.3	ProteinID:ABF94629.1	ProteinID:BAF11285.1	ProteinID:BAS82955.1
ProteinID:EEE58581.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009536
GO:GO:0009707	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0019375	GO:GO:0035250
EnsemblPlantsGene:Os03g0214400	EnsemblPlants:Os03t0214400-01	PFAM:PF13692	PANTHER:PTHR12526	PANTHER:PTHR12526:SF460	UniProt:Q10Q06
SUPFAM:SSF53756	UniParc:UPI0000DB414C	RefSeq:XP_015630517.1	RefSeq:XP_015630518.1	SEG:seg	:

Description

Similar to Digalactosyldiacylglycerol synthase 2. (Os03t0214400-01)

Coordinates

chr3:-:5994179..5997434

Molecular Weight (calculated)

54175.5 Da

IEP (calculated)

9.056

GRAVY (calculated)

-0.271

Length

476 amino acids

Sequence
(BLAST)

001: MSTRRHLAVF TTASLPWMTG TAINPLFRAA YLAKDGDREV TLVIPWLSLR DQELVYPNKI VFGSPLEHEA YVRRWIEERI SFRPSFSIKF YPAKFSKELR
101: SILPVGDITE CIPDEVADVA VLEEPEHLNW YHHGRKWKNK FRRVIGVVHT NYIAYVKREK NGQAIACFMK YMNTWVTRIY CHKIIRLSGA TQDLPRSVVC
201: NVHGVNPKFL EVGKLKLKQL RNGEIAFTKG AYYIGKMVWS KGYRELLDLL SKYQSKLVGL EVDLYGSGED SDEVRKSAEL LSLAVKVHPG RDHADPLFHD
301: YKVFINPSTT DVVCTTTAEA LAMGKIVICA NHPSNEFFKQ FPNCRTYDSG EEFVQLTLDA LAEQPAPLTD MQSHDLSWEA ATERFMEAAE LNLPISAEPR
401: IHQTSKVSLP AFMRTRKLKQ SLEDASVYLH QALSGLEVTR RAFGAVPKTL QPDEQLCNDL GLAPAKKKRL KLKLMT

Best Arabidopsis Sequence Match ( AT4G00550.2 )
(BLAST)

001: MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD

Arabidopsis Description

DGD2Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W1S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.