Factsheet for Os11t0158300-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
golgi 1
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion, nucleus, plasma membrane, plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0268300-01	Rice	golgi	20.51	8.64
Os03t0214400-01	Rice	plasma membrane	19.49	7.98
Os11t0158400-01	Rice	cytosol	20.51	5.43
Os02t0539100-01	Rice	cytosol, mitochondrion, nucleus	21.03	5.11
Os04t0416900-01	Rice	cytosol, mitochondrion	1.03	2.6

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:4349834	ProteinID:ABA91564.1	EMBL:AK070475	ProteinID:BAF27650.1
ProteinID:BAT12776.1	ProteinID:EAZ17509.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009987
GO:GO:0016787	GO:GO:0043231	GO:GO:0090305	InterPro:IPR002885	InterPro:IPR011990	EnsemblPlantsGene:Os11g0158300
EnsemblPlants:Os11t0158300-01	PFAM:PF01535	PANTHER:PTHR24015	PANTHER:PTHR24015:SF400	InterPro:Pentatricopeptide_repeat	UniProt:Q2RAB2
TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00006824A5	RefSeq:XP_015617248.1	SEG:seg	:

Description

Pentatricopeptide repeat containing protein. (Os11t0158300-01)

Coordinates

chr11:+:2814473..2817216

Molecular Weight (calculated)

21122.0 Da

IEP (calculated)

10.070

GRAVY (calculated)

0.123

Length

195 amino acids

Sequence
(BLAST)

001: MRRHYAVLLR RAASLPSLPL VASLHAAALR RGAVLAPSLI HAYSACGDLA SARNLFDELP PRDRTLSART ALASAMSAHG RCREVLDLFA GLAEEEMDDK
101: AVTAVLAACA RAGMVDEGRR VFATVRRRPA LQHYTCMVEM LGRAGEVEEA ERLVARMGAR PDRVICAVLL AACRVHGRVD VAGRVHGLMR RYGIA

Best Arabidopsis Sequence Match ( AT5G15340.1 )
(BLAST)

001: MKCLSYQKVR LLLRHCAHRS FLRPGKELHA VLTTSGLKKA PRSYLSNALF QFYASSGEMV TAQKLFDEIP LSEKDNVDWT TLLSSFSRYG LLVNSMKLFV
101: EMRRKRVEID DVSVVCLFGV CAKLEDLGFA QQGHGVAVKM GVLTSVKVCN ALMDMYGKCG LVSEVKRIFE ELEEKSVVSW TVVLDTVVKW EGLERGREVF
201: HEMPERNAVA WTVMVAGYLG AGFTREVLEL LAEMVFRCGH GLNFVTLCSM LSACAQSGNL VVGRWVHVYA LKKEMMMGEE ASYDDVMVGT ALVDMYAKCG
301: NIDSSMNVFR LMRKRNVVTW NALFSGLAMH GKGRMVIDMF PQMIREVKPD DLTFTAVLSA CSHSGIVDEG WRCFHSLRFY GLEPKVDHYA CMVDLLGRAG
401: LIEEAEILMR EMPVPPNEVV LGSLLGSCSV HGKVEIAERI KRELIQMSPG NTEYQILMSN MYVAEGRSDI ADGLRGSLRK RGIRKIPGLS SIYVNDSVHR
501: FSSGDRSHPR TKEIYLKLNE VIERIRSAGY VPDVSGLVSH SEGDLEEKEQ ALCCHSEKLA VCFGLLETKP STPLLVFKNL RICRDCHSAM KIVSKVYDRE
601: IIIRDRNRFH QFKGGSCSCS DYW

Arabidopsis Description

PCMP-H91Pentatricopeptide repeat-containing protein At5g15340, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LXE8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.