Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016731_P001 | Maize | nucleus | 77.31 | 78.28 |
| EES05202 | Sorghum | plastid | 77.06 | 78.03 |
| Zm00001d053174_P001 | Maize | cytosol | 12.97 | 77.04 |
| Os11t0158400-01 | Rice | cytosol | 59.73 | 65.08 |
| Os04t0416900-01 | Rice | cytosol, mitochondrion | 6.23 | 64.94 |
| Os03t0268300-01 | Rice | golgi | 32.67 | 56.59 |
| Os03t0214400-01 | Rice | plasma membrane | 31.92 | 53.78 |
| Zm00001d043881_P001 | Maize | plastid | 11.1 | 47.85 |
| Zm00001d018594_P001 | Maize | plastid | 9.6 | 44.77 |
| Zm00001d025459_P001 | Maize | plastid | 17.21 | 42.33 |
| Zm00001d005882_P004 | Maize | cytosol | 17.71 | 41.52 |
| Os11t0158300-01 | Rice | mitochondrion | 5.11 | 21.03 |
Protein Annotations
| Gene3D:3.40.50.2000 | EntrezGene:4329584 | MapMan:5.3.3 | EMBL:AK120285 | ProteinID:BAD28837.1 | ProteinID:BAF08970.1 |
| ProteinID:BAS79088.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009536 |
| GO:GO:0009707 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 | GO:GO:0019375 | GO:GO:0035250 |
| InterPro:Glyco_trans_1 | EnsemblPlantsGene:Os02g0539100 | EnsemblPlants:Os02t0539100-01 | PFAM:PF00534 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF532 |
| UniProt:Q6ER83 | SUPFAM:SSF53756 | UniParc:UPI00003CE801 | RefSeq:XP_015626791.1 | SEG:seg | : |
Description
Similar to Digalactosyldiacylglycerol synthase 1. (Os02t0539100-01)
Coordinates
chr2:+:19973187..19977396
Molecular Weight (calculated)
89314.7 Da
IEP (calculated)
6.480
GRAVY (calculated)
-0.454
Length
802 amino acids
Sequence
(BLAST)
(BLAST)
001: MEARASPSPS PQRPASMGRG GGGGGGGGDA SAALSFIYKG WREVRDSASA DLRLMRARAD SLRTLADREL EHLLVSASTT VAAPAPPVAA GAPIAEVEFV
101: RNRIQPKISE LRRQYAASGD WELGLGRRVL EGWVAPPPPR GATTARVDLS GITAIRNALV PEVAGGGGAS TAWWSGDEME EEEEKEWEVV RMIRGGLKEL
201: ERRSQSSGEI LGGIPGPSEL VEKFKSRLKS FNMEPLGSKE VPPLDLTEIM ANLVRQSGPF LDQLGLRREL RDKLVETLYS RQNHSLSADS SLLGDDNSTD
301: ELDLRIASVL QSTGYHTDDG LWNEPSKYEV SDNKRHVAIV TTASLPWMTG TAVNPLFRAA YLARNSKQDV TLVVPWLCKS DQELVYPNSM TFSSPEEQET
401: YIKKWLEERL GFESNFKISF YPGKFSKERR SIIPAGDTSQ FISSREADIA ILEEPEHLNW YHHGNRWTDK FNHVVGVVHT NYLEYIKREK NGALQAFLVK
501: HINNWVTRAY CDKVLRLSAA TQDLPKSIIC NVHGVNPKFL KIGDKIMADR ENGQQSFSKG AYFLGKMVWA KGYRELLDLL DKRKSDLQGF KLDVYGSGED
601: SQEVQSTAKK LNLNLNFFKG RDHADDSLHG YKVFINPSIS DVLCTATAEA LAMGKFVICA EHPSNEFFMS FPNCLTYRTP EEFVARVNEA MAREPQPLTP
701: EQRYNLSWEA ATERFMEYSD LDKVLSQPVT EGVHRSKTRR TIQSNLSDAM DGGLAFAHHC LTGSEVLRLA TGAIPGTRDY DKQHCVDMGL LPPQVQHPVY
801: GW
101: RNRIQPKISE LRRQYAASGD WELGLGRRVL EGWVAPPPPR GATTARVDLS GITAIRNALV PEVAGGGGAS TAWWSGDEME EEEEKEWEVV RMIRGGLKEL
201: ERRSQSSGEI LGGIPGPSEL VEKFKSRLKS FNMEPLGSKE VPPLDLTEIM ANLVRQSGPF LDQLGLRREL RDKLVETLYS RQNHSLSADS SLLGDDNSTD
301: ELDLRIASVL QSTGYHTDDG LWNEPSKYEV SDNKRHVAIV TTASLPWMTG TAVNPLFRAA YLARNSKQDV TLVVPWLCKS DQELVYPNSM TFSSPEEQET
401: YIKKWLEERL GFESNFKISF YPGKFSKERR SIIPAGDTSQ FISSREADIA ILEEPEHLNW YHHGNRWTDK FNHVVGVVHT NYLEYIKREK NGALQAFLVK
501: HINNWVTRAY CDKVLRLSAA TQDLPKSIIC NVHGVNPKFL KIGDKIMADR ENGQQSFSKG AYFLGKMVWA KGYRELLDLL DKRKSDLQGF KLDVYGSGED
601: SQEVQSTAKK LNLNLNFFKG RDHADDSLHG YKVFINPSIS DVLCTATAEA LAMGKFVICA EHPSNEFFMS FPNCLTYRTP EEFVARVNEA MAREPQPLTP
701: EQRYNLSWEA ATERFMEYSD LDKVLSQPVT EGVHRSKTRR TIQSNLSDAM DGGLAFAHHC LTGSEVLRLA TGAIPGTRDY DKQHCVDMGL LPPQVQHPVY
801: GW
001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
Arabidopsis Description
DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.