Factsheet for Zm00001d018594_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

plastid: 22065420

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053174_P001	Maize	cytosol	42.44	54.07
Zm00001d043881_P001	Maize	plastid	39.53	36.56
Zm00001d005882_P004	Maize	cytosol	58.72	29.53
Zm00001d025459_P001	Maize	plastid	43.02	22.7
Zm00001d016731_P001	Maize	nucleus	56.4	12.25
EES05202	Sorghum	plastid	54.65	11.87
Zm00001d028211_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	27.91	10.11
Os02t0539100-01	Rice	cytosol, mitochondrion, nucleus	44.77	9.6
Zm00001d003750_P001	Maize	cytosol	41.86	9.2
Zm00001d028571_P001	Maize	golgi	25.0	9.05
Zm00001d053149_P002	Maize	plastid	39.53	8.92
Zm00001d039953_P001	Maize	cytosol	2.33	2.03

Protein Annotations

MapMan:17.1.3.1.23	Gene3D:3.30.1230.20	UniProt:A0A1D6HQH2	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR038579
ProteinID:ONM50818.1	PFAM:PD006584	PFAM:PF01249	PANTHER:PTHR10442	PANTHER:PTHR10442:SF6	InterPro:Ribosomal_S21e
InterPro:Ribosomal_S21e_sf	UniParc:UPI0008425B09	EnsemblPlantsGene:Zm00001d018594	EnsemblPlants:Zm00001d018594_P001	EnsemblPlants:Zm00001d018594_T001	:

Description

Digalactosyldiacylglycerol synthase 2 chloroplastic

Coordinates

chr7:+:177173..178931

Molecular Weight (calculated)

19951.7 Da

IEP (calculated)

8.463

GRAVY (calculated)

-0.809

Length

172 amino acids

Sequence
(BLAST)

001: MGKFVICAEH PSNEFFMSFL KCLTYKTSEE FVARVKEAMD REPQPLTPEQ RYNLSWETAT ERFMEYLDLE KVLNNEAAQP EQGRKRKNKR TSQPNLSSVF
101: RAHLREIKNE EGKTVDLYVP RKCLATNRII TAKDHASVQI NIGHLDANGL YDGDADSLLD RSWQKKKAEI KQ

Best Arabidopsis Sequence Match ( AT3G11670.1 )
(BLAST)

001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW

Arabidopsis Description

DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.