Factsheet for Zm00001d053149_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
nucleus 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG27790	Sorghum	nucleus	89.37	92.28
TraesCSU01G192800.1	Wheat	mitochondrion	53.15	87.85
TraesCSU01G187100.2	Wheat	cytosol	65.22	85.25
Os11t0158400-01	Rice	cytosol	80.84	83.7
TraesCS4D01G112200.1	Wheat	nucleus	77.69	81.43
TraesCSU01G186800.1	Wheat	plasma membrane	64.17	80.96
TraesCS4A01G200600.1	Wheat	nucleus	77.3	80.91
HORVU4Hr1G020770.3	Barley	nucleus	76.51	76.71
KRH75753	Soybean	mitochondrion	15.22	75.32
Zm00001d053174_P001	Maize	cytosol	13.12	74.07
PGSC0003DMT400072559	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	7.61	70.73
Solyc10g081870.1.1	Tomato	cytosol, extracellular, peroxisome	10.37	68.1
GSMUA_Achr10P...	Banana	cytosol	66.4	63.97
VIT_08s0105g00260.t01	Wine grape	cytosol	64.83	61.98
GSMUA_Achr11P...	Banana	cytosol	66.01	61.72
KRH68005	Soybean	nucleus	63.39	61.69
KRG96264	Soybean	nucleus	63.39	61.37
Zm00001d016731_P001	Maize	nucleus	62.86	60.48
PGSC0003DMT400054943	Potato	cytosol	61.42	60.47
Solyc01g007100.2.1	Tomato	cytosol, plastid	61.15	60.05
Zm00001d003750_P001	Maize	cytosol	61.68	60.03
Bra034821.1-P	Field mustard	cytosol, plastid	61.68	58.17
PGSC0003DMT400072563	Potato	plastid	61.02	58.12
CDY08505	Canola	cytosol, plastid	61.68	58.1
Solyc10g081900.1.1	Tomato	plastid	60.63	57.89
CDY01047	Canola	cytosol, plastid	61.02	57.69
AT3G11670.1	Thale cress	plastid	60.76	57.3
Zm00001d039953_P001	Maize	cytosol	14.3	55.33
Zm00001d028211_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	33.73	54.11
Zm00001d028571_P001	Maize	golgi	32.55	52.21
Zm00001d043881_P001	Maize	plastid	10.24	41.94
Zm00001d025459_P001	Maize	plastid	17.32	40.49
Zm00001d018594_P001	Maize	plastid	8.92	39.53
Zm00001d005882_P004	Maize	cytosol	17.32	38.6
KRH49694	Soybean	mitochondrion	23.1	32.41

Protein Annotations

EntrezGene:100383181	Gene3D:3.40.50.2000	MapMan:5.3.3	UniProt:A0A1D6QMD3	ProteinID:AQK58825.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009536	GO:GO:0009707	GO:GO:0009719	GO:GO:0009809	GO:GO:0009867	GO:GO:0009987
GO:GO:0016020	GO:GO:0016740	GO:GO:0016757	GO:GO:0019375	GO:GO:0019748	GO:GO:0031408
PFAM:PF13692	PANTHER:PTHR12526	PANTHER:PTHR12526:SF532	SUPFAM:SSF53756	UniParc:UPI0008453B57	EnsemblPlantsGene:Zm00001d053149
EnsemblPlants:Zm00001d053149_P002	EnsemblPlants:Zm00001d053149_T002	SEG:seg	:	:	:

Description

Digalactosyldiacylglycerol synthase 1 chloroplastic

Coordinates

chr4:+:216214682..216218840

Molecular Weight (calculated)

85192.0 Da

IEP (calculated)

7.759

GRAVY (calculated)

-0.394

Length

762 amino acids

Sequence
(BLAST)

001: MASFGVDTRP AAAASGGGVG VAGTREGALS FLSRGLREDL RLIRARAGEL ETFLSAPVPE PELFARLRRA YSCSASSSRT RLDLSAIGKA FEADAWRGAR
101: TARWRWEAET EAEEWEPVRM VKAHLRELER RRLAQSPSDM LHKLKLSLKS LTFAPEASED VLPLDLGELL AYFVKQSVPL FDQLGIKRDV CDKLVESLCS
201: KRKDHPAYSF LSATESSSLK NDNVGNELDL RIASALQSTG HHYEGGFWSD GHKSDISGKR HVAIVTTASL PWMTGTAVNP LFRAAYLAKS CKQDVTLVVP
301: WLCKSDQELV YPNSMTFSSP EEQEKYMRNW LEERVGFKTD FKISFYPGKF QKERRSIIPA GDTSQFIPSK EADIAILEEP EHLNWYHHGK RWTDKFNHVI
401: GVVHTNYLEY IKREKNGAIQ AFFVKHINNL VARAYCHKIL RLSGATQDLP KSTICNVHGV NPKFLEVGER IAAERESGQQ SFSKGAYFLG KMVWAKGYRE
501: LIDLFAKHNS DLEGFKLDIY GNGEDSHEVQ SAARKLNLNL NFHKGRDHAD DSLHGYKPEL LSSVAVFLNI CLPAYMARYK VFINPSISDV LCTATAEALA
601: MGKFVVCADH PSNDFFRSFP NCLTYKTSED FVARVKEAMA RDPQPLTPEQ RYNLSWDAAT QRFMEHSELD KVLNGDSNSE CGGSVGTETG KSAGTMMRRS
701: ASAPNMSDVV DGGLAFVHYC FTGSELLRLS TGAVPGTRDY NKQHSLDLRL PPPQVQNPVY GW

Best Arabidopsis Sequence Match ( AT3G11670.1 )
(BLAST)

001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW

Arabidopsis Description

DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.