Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G192800.1 | Wheat | mitochondrion | 79.07 | 100.0 |
| TraesCSU01G186800.1 | Wheat | plasma membrane | 97.08 | 93.71 |
| TraesCS4D01G112200.1 | Wheat | nucleus | 97.94 | 78.54 |
| TraesCS4A01G200600.1 | Wheat | nucleus | 97.26 | 77.88 |
| PGSC0003DMT400072559 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 10.63 | 75.61 |
| KRH75753 | Soybean | mitochondrion | 19.73 | 74.68 |
| HORVU4Hr1G020770.3 | Barley | nucleus | 95.71 | 73.42 |
| Solyc10g081870.1.1 | Tomato | cytosol, extracellular, peroxisome | 14.24 | 71.55 |
| Os11t0158400-01 | Rice | cytosol | 87.82 | 69.57 |
| KXG27790 | Sorghum | nucleus | 87.65 | 69.24 |
| Zm00001d053149_P002 | Maize | plastid | 85.25 | 65.22 |
| GSMUA_Achr10P... | Banana | cytosol | 78.04 | 57.52 |
| KRH68005 | Soybean | nucleus | 75.81 | 56.45 |
| KRG96264 | Soybean | nucleus | 75.99 | 56.29 |
| VIT_08s0105g00260.t01 | Wine grape | cytosol | 76.67 | 56.09 |
| PGSC0003DMT400054943 | Potato | cytosol | 73.41 | 55.3 |
| GSMUA_Achr11P... | Banana | cytosol | 77.19 | 55.21 |
| Solyc01g007100.2.1 | Tomato | cytosol, plastid | 72.56 | 54.51 |
| PGSC0003DMT400072563 | Potato | plastid | 72.56 | 52.88 |
| Solyc10g081900.1.1 | Tomato | plastid | 72.21 | 52.76 |
| CDY08505 | Canola | cytosol, plastid | 72.9 | 52.53 |
| CDY01047 | Canola | cytosol, plastid | 72.56 | 52.48 |
| Bra034821.1-P | Field mustard | cytosol, plastid | 72.73 | 52.48 |
| AT3G11670.1 | Thale cress | plastid | 71.7 | 51.73 |
| KRH49694 | Soybean | mitochondrion | 29.67 | 31.86 |
Protein Annotations
| EnsemblPlants:TraesCSU01G187100.2 | EnsemblPlantsGene:TraesCSU01G187100 | Gene3D:3.40.50.2000 | InterPro:Glyco_trans_1 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF532 |
| PFAM:PF00534 | SEG:seg | SUPFAM:SSF53756 | MapMan:5.3.3 | : | : |
Description
No Description!
Coordinates
chrUn:-:281709253..281713231
Molecular Weight (calculated)
65662.4 Da
IEP (calculated)
6.471
GRAVY (calculated)
-0.432
Length
583 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFASEASEE VPPLDLNELL AYFLKQSGPL FDQLGIKRDV CDKLVESLCS KRKDHFACDP LSTSESSSFR NDNTCDELDL RIASVLQSTG HHYEGGFWDD
101: GQKYDVADKR HVAIVTTASL PWMTGTAVNP LFRAAYLAKS SKQYVTLMVP WLCKSDQELV YPNNMTFSSP EDQETYIRNW LEERVGFKTD FRISFYPGKF
201: QKERRSIIPA GDTSQFIPSK EADIAILEEP EHLNWYHHGK RWTDKFNHVV GVVHTNYLEY IKREKNGAIQ AFFVKHINNL VARAYCHKVL RLSGATQDLA
301: RSMICNVHGV NPKFLEVGER IAAERESGEQ SMSKGAYFLG KMVWAKGYRE LIDLLAKHKT DLDGFKLDVY GNGEDSVEVQ SAAKKLDLNL NFHKGRDHAD
401: DSLHGYKVFV NPSISDVLCT ATAEALAMGK FVVCADHPSN DFFRSFPNCL TYTTSEDFVA KVKEAMTRDP QPLTPEQRYN LSWEAATQRF MEHSELDKVL
501: SSNGDSASTS GSSVDRRMKK SASLPNMSDI VDGGLAFAHY CFTGSELLRL STGAVPGTLN YNKQHSVDMH LLPPQVQNPV YGW
101: GQKYDVADKR HVAIVTTASL PWMTGTAVNP LFRAAYLAKS SKQYVTLMVP WLCKSDQELV YPNNMTFSSP EDQETYIRNW LEERVGFKTD FRISFYPGKF
201: QKERRSIIPA GDTSQFIPSK EADIAILEEP EHLNWYHHGK RWTDKFNHVV GVVHTNYLEY IKREKNGAIQ AFFVKHINNL VARAYCHKVL RLSGATQDLA
301: RSMICNVHGV NPKFLEVGER IAAERESGEQ SMSKGAYFLG KMVWAKGYRE LIDLLAKHKT DLDGFKLDVY GNGEDSVEVQ SAAKKLDLNL NFHKGRDHAD
401: DSLHGYKVFV NPSISDVLCT ATAEALAMGK FVVCADHPSN DFFRSFPNCL TYTTSEDFVA KVKEAMTRDP QPLTPEQRYN LSWEAATQRF MEHSELDKVL
501: SSNGDSASTS GSSVDRRMKK SASLPNMSDI VDGGLAFAHY CFTGSELLRL STGAVPGTLN YNKQHSVDMH LLPPQVQNPV YGW
001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
Arabidopsis Description
DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.