Factsheet for PGSC0003DMT400072559

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 2
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion, plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g081870.1.1	Tomato	cytosol, extracellular, peroxisome	93.9	66.38
TraesCSU01G192800.1	Wheat	mitochondrion	75.61	13.45
KRH49694	Soybean	mitochondrion	75.61	11.42
TraesCSU01G187100.2	Wheat	cytosol	75.61	10.63
TraesCSU01G186800.1	Wheat	plasma membrane	75.61	10.26
TraesCS4D01G112200.1	Wheat	nucleus	74.39	8.39
PGSC0003DMT400072563	Potato	plastid	81.71	8.38
PGSC0003DMT400054943	Potato	cytosol	78.05	8.27
PGSC0003DMT400026609	Potato	cytosol	46.34	8.24
TraesCS4A01G200600.1	Wheat	nucleus	73.17	8.24
PGSC0003DMT400000445	Potato	endoplasmic reticulum	46.34	8.23
VIT_08s0105g00260.t01	Wine grape	cytosol	78.05	8.03
KRH68005	Soybean	nucleus	75.61	7.92
HORVU4Hr1G020770.3	Barley	nucleus	73.17	7.89
KRG96264	Soybean	nucleus	75.61	7.88
GSMUA_Achr11P...	Banana	cytosol	78.05	7.85
GSMUA_Achr10P...	Banana	cytosol	75.61	7.84
KXG27790	Sorghum	nucleus	69.51	7.72
CDY01047	Canola	cytosol, plastid	75.61	7.69
Bra034821.1-P	Field mustard	cytosol, plastid	75.61	7.67
CDY08505	Canola	cytosol, plastid	75.61	7.66
Zm00001d053149_P002	Maize	plastid	70.73	7.61
Os11t0158400-01	Rice	cytosol	68.29	7.61
AT3G11670.1	Thale cress	plastid	74.39	7.55
KRH75753	Soybean	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400072559	EnsemblPlantsGene:PGSC0003DMG402028232	PANTHER:PTHR12526	PANTHER:PTHR12526:SF532	PGSC:PGSC0003DMG402028232	UniParc:UPI000294C8F5
UniProt:M1CQJ3	MapMan:50.2.4	:	:	:	:

Description

Digalactosyldiacylglycerol synthase [Source:PGSC_GENE;Acc:PGSC0003DMG402028232]

Coordinates

chr10:+:56167203..56169985

Molecular Weight (calculated)

9516.3 Da

IEP (calculated)

5.035

GRAVY (calculated)

-0.280

Length

82 amino acids

Sequence
(BLAST)

1: MLLVPWLCKS DQELIFPNHL SLSSSEDQDL YICNWLEERI GFKADFRISF YPGKFSKERR SIIPAGDTSQ FIPSRDADVA KF

Best Arabidopsis Sequence Match ( AT3G11670.2 )
(BLAST)

001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHK

Arabidopsis Description

DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.