CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	mitochondrion, plastid
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68005	Soybean	nucleus	95.55	96.04
KRH75753	Soybean	mitochondrion	17.03	87.01
TraesCSU01G192800.1	Wheat	mitochondrion	46.63	79.61
TraesCSU01G187100.2	Wheat	cytosol	56.29	75.99
PGSC0003DMT400072559	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	7.88	75.61
VIT_08s0105g00260.t01	Wine grape	cytosol	75.48	74.53
TraesCSU01G186800.1	Wheat	plasma membrane	56.42	73.51
Solyc10g081870.1.1	Tomato	cytosol, extracellular, peroxisome	10.42	70.69
PGSC0003DMT400054943	Potato	cytosol	68.87	70.03
Solyc01g007100.2.1	Tomato	cytosol, plastid	68.74	69.72
PGSC0003DMT400072563	Potato	plastid	70.78	69.62
GSMUA_Achr10P...	Banana	cytosol	69.89	69.53
Solyc10g081900.1.1	Tomato	plastid	70.14	69.17
GSMUA_Achr11P...	Banana	cytosol	69.76	67.36
Bra034821.1-P	Field mustard	cytosol, plastid	69.12	67.33
AT3G11670.1	Thale cress	plastid	69.12	67.33
CDY01047	Canola	cytosol, plastid	68.74	67.12
CDY08505	Canola	cytosol, plastid	68.74	66.87
TraesCS4D01G112200.1	Wheat	nucleus	61.5	66.58
Os11t0158400-01	Rice	cytosol	61.88	66.17
KXG27790	Sorghum	nucleus	62.01	66.12
TraesCS4A01G200600.1	Wheat	nucleus	60.99	65.93
Zm00001d053149_P002	Maize	plastid	61.37	63.39
HORVU4Hr1G020770.3	Barley	nucleus	61.12	63.29
KRH40509	Soybean	cytosol	32.27	54.86
KRH00685	Soybean	cytosol	32.15	54.64
KRH15982	Soybean	cytosol	7.62	51.28
KRH49694	Soybean	mitochondrion	24.14	34.99

Protein Annotations

Gene3D:3.40.50.2000	MapMan:5.3.3	EntrezGene:548059	EMBL:ACUP02012150	EnsemblPlantsGene:GLYMA_19G200000	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009527	GO:GO:0009536
GO:GO:0009707	GO:GO:0009877	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0016757
GO:GO:0019375	GO:GO:0035250	GO:GO:0043661	GO:GO:0046481	InterPro:Glyco_trans_1	UniProt:I1NAU6
EnsemblPlants:KRG96264	ProteinID:KRG96264	ProteinID:KRG96264.1	PFAM:PF00534	PANTHER:PTHR12526	PANTHER:PTHR12526:SF532
SUPFAM:SSF53756	UniParc:UPI00023DDCA5	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:45701249..45706946

Molecular Weight (calculated)

89929.6 Da

IEP (calculated)

7.919

GRAVY (calculated)

-0.542

Length

787 amino acids

Sequence
(BLAST)

001: MATHPQTPTS SNAFSFISKG WREVRDSADA DLRLMRDRAN SFKDLATSFD RELENFFNSA TPPFSVPAMR SPPPKEIEFV KSLRPKLSEI RRAYSSPDFS
101: KKVLEKWRPR TQIRINLSAI KNAIVSAEEV GQEEEEGIVD FEKRRRRRLS FWEEWKNDGE GESRDWEPIR VLKTRFKEFE KRGSSFEAFK NSEFVEKFKS
201: SLKSMCKEPQ ESKEVPPLDV SELLAYIVKQ SGPFLDHLGV KRDICDKIVE SLYSKCKNHH LLHTLSGEES SVLGNGNIND ELDLRIASVL QSTGHRYEGG
301: FWTDHAKHVP LDNERHVAIV TTASLPWMTG TAVNPLFRAA YLSQSAKQKV TLLVPWLCKS DQELVYPSNV TFTSPEEQEA YIRSWLEERI GFKADFKISF
401: YPGKFSKARR SIIPAGDTSQ FIPSRDADIA ILEEPEHLNW YHHGKRWTDK FNHVVGIVHT NYLEYIKREK NGALQAFFVK HINNWVTRAY CHKVLRLSAA
501: TQDLPKSVIC NVHGVNPKFL KIGEKIAAER ELGQKAFTKG AYFLGKMVWA KGYKELIDLL AKHKADLDGF KLDVFGNGED ANEVQSAARR LDLNLNFQKG
601: RDHADDSLHR YKVFINPSIS DVLCTATAEA LAMGKFVVCA DHPSNEFFRS FPNCLTYRTS EDFVTKVKEA LENEPYPLTP EQRYQLSWEA ATQRFMEYSE
701: LDGILNKENN GEKSRVDKGK LIAKSASMPN LTELVDGGLA FAHYCLTGNE FLRLCTGAIP GTRDYDKQHC KDLHLLPPQV ENPIYGW

Best Arabidopsis Sequence Match ( AT3G11670.1 )
(BLAST)

001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW

Arabidopsis Description

DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.