Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 5
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400054943 | Potato | cytosol | 91.88 | 92.12 |
| TraesCSU01G192800.1 | Wheat | mitochondrion | 45.62 | 76.79 |
| Solyc10g081900.1.1 | Tomato | plastid | 78.87 | 76.69 |
| Solyc10g081870.1.1 | Tomato | cytosol, extracellular, peroxisome | 11.34 | 75.86 |
| KRH75753 | Soybean | mitochondrion | 14.69 | 74.03 |
| TraesCSU01G187100.2 | Wheat | cytosol | 54.51 | 72.56 |
| TraesCSU01G186800.1 | Wheat | plasma membrane | 54.51 | 70.03 |
| VIT_08s0105g00260.t01 | Wine grape | cytosol | 71.26 | 69.39 |
| KRH68005 | Soybean | nucleus | 69.85 | 69.22 |
| KRG96264 | Soybean | nucleus | 69.72 | 68.74 |
| GSMUA_Achr10P... | Banana | cytosol | 66.24 | 64.98 |
| KXG27790 | Sorghum | nucleus | 61.34 | 64.5 |
| TraesCS4D01G112200.1 | Wheat | nucleus | 60.05 | 64.1 |
| AT3G11670.1 | Thale cress | plastid | 66.49 | 63.86 |
| Os11t0158400-01 | Rice | cytosol | 60.57 | 63.86 |
| Bra034821.1-P | Field mustard | cytosol, plastid | 66.37 | 63.74 |
| CDY01047 | Canola | cytosol, plastid | 65.98 | 63.52 |
| TraesCS4A01G200600.1 | Wheat | nucleus | 59.54 | 63.46 |
| CDY08505 | Canola | cytosol, plastid | 66.11 | 63.41 |
| GSMUA_Achr11P... | Banana | cytosol | 66.49 | 63.31 |
| Zm00001d053149_P002 | Maize | plastid | 60.05 | 61.15 |
| HORVU4Hr1G020770.3 | Barley | nucleus | 59.54 | 60.79 |
| Solyc10g017580.2.1 | Tomato | cytosol | 30.67 | 51.63 |
| Solyc01g094170.2.1 | Tomato | cytosol | 27.96 | 51.54 |
| KRH49694 | Soybean | mitochondrion | 22.55 | 32.23 |
Protein Annotations
| Gene3D:3.40.50.2000 | MapMan:5.3.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009536 | GO:GO:0009707 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 |
| GO:GO:0019375 | GO:GO:0035250 | UniProt:K4ASS6 | PFAM:PF13692 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF532 |
| SUPFAM:SSF53756 | EnsemblPlantsGene:Solyc01g007100.2 | EnsemblPlants:Solyc01g007100.2.1 | UniParc:UPI00027626F2 | SEG:seg | : |
Description
No Description!
Coordinates
chr1:-:1654055..1658743
Molecular Weight (calculated)
87735.1 Da
IEP (calculated)
7.557
GRAVY (calculated)
-0.510
Length
776 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNFKPPETK TTPSSSSYSS TAEKAFSLIS KGWKEVRSSA DADLQLIRNR AKELENFLSS VPTITATATA TATATTPGEI DFVKKLRPKL SEIRRAYSSP
101: DFNWAPKGKL RIDLSGITNA IVTESEDEKL GKWRREKRFK DEKQFGELSN WEPIRAFRNR LREMEVEIKS SNASSPVEIF EGIKNSEFME KVKSSFKSIC
201: KEPEESKGVP PLDVPELLAY LVRQSSPFLD QIGIRKDISD KIVESLCSKR RNKLLPEGDC SLIEGDNMID ELELRIASVL QSTGHHYEGG FWSNSTKQNV
301: SDGKRHVAIV TTASLPWMTG TAVNPLFRAA YLAKSEKQNV TLLVPWLCKS DQELVYPNNL TFSSPEEQEL YIRNWLEERV GFKTDFKISF YPGKFSKERR
401: SILPAGDTTQ FIPSRDADIA ILEEPEHLNW YHHGKRWTDK FNHVVGIVHT NYLEYIKREK NGALQAFLVK HVNNWVTRAH CDKVLRLSAA TQDLPRSVVC
501: NVHGVNPKFL KIGEKMAAER QNGQQVFSKG AYFLGKMVWA KGYRELIDLL AKHKSDLDGF NMDLFGNGED AHEVQTTART LNLNVNFMKG RDHADDSLHS
601: YKVFINPSIS DVLCTATAEA LAMGKFVVCA DHPSNEFFQA FPNCLTYKTS EDFVTKVKEA MTGEPQPLTP EEQYKLSWEA ATQRFIEYSD LDKVLTSEKG
701: GDRRKTRIKG IGKSVSMPNL GGMVDGSLAF AQYCLTGNEF VRWCSGATPG TRDFDQQHCE DLNLLPPQVE NPIYGW
101: DFNWAPKGKL RIDLSGITNA IVTESEDEKL GKWRREKRFK DEKQFGELSN WEPIRAFRNR LREMEVEIKS SNASSPVEIF EGIKNSEFME KVKSSFKSIC
201: KEPEESKGVP PLDVPELLAY LVRQSSPFLD QIGIRKDISD KIVESLCSKR RNKLLPEGDC SLIEGDNMID ELELRIASVL QSTGHHYEGG FWSNSTKQNV
301: SDGKRHVAIV TTASLPWMTG TAVNPLFRAA YLAKSEKQNV TLLVPWLCKS DQELVYPNNL TFSSPEEQEL YIRNWLEERV GFKTDFKISF YPGKFSKERR
401: SILPAGDTTQ FIPSRDADIA ILEEPEHLNW YHHGKRWTDK FNHVVGIVHT NYLEYIKREK NGALQAFLVK HVNNWVTRAH CDKVLRLSAA TQDLPRSVVC
501: NVHGVNPKFL KIGEKMAAER QNGQQVFSKG AYFLGKMVWA KGYRELIDLL AKHKSDLDGF NMDLFGNGED AHEVQTTART LNLNVNFMKG RDHADDSLHS
601: YKVFINPSIS DVLCTATAEA LAMGKFVVCA DHPSNEFFQA FPNCLTYKTS EDFVTKVKEA MTGEPQPLTP EEQYKLSWEA ATQRFIEYSD LDKVLTSEKG
701: GDRRKTRIKG IGKSVSMPNL GGMVDGSLAF AQYCLTGNEF VRWCSGATPG TRDFDQQHCE DLNLLPPQVE NPIYGW
001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
Arabidopsis Description
DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.