Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G192800.1 | Wheat | mitochondrion | 56.23 | 90.02 |
| Zm00001d053149_P002 | Maize | plastid | 92.28 | 89.37 |
| TraesCSU01G187100.2 | Wheat | cytosol | 69.24 | 87.65 |
| Os11t0158400-01 | Rice | cytosol | 85.91 | 86.14 |
| TraesCSU01G186800.1 | Wheat | plasma membrane | 68.29 | 83.44 |
| TraesCS4D01G112200.1 | Wheat | nucleus | 82.11 | 83.36 |
| TraesCS4A01G200600.1 | Wheat | nucleus | 81.84 | 82.97 |
| HORVU4Hr1G020770.3 | Barley | nucleus | 80.76 | 78.42 |
| KRH75753 | Soybean | mitochondrion | 15.85 | 75.97 |
| PGSC0003DMT400072559 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 7.72 | 69.51 |
| Solyc10g081870.1.1 | Tomato | cytosol, extracellular, peroxisome | 10.57 | 67.24 |
| GSMUA_Achr10P... | Banana | cytosol | 69.38 | 64.73 |
| VIT_08s0105g00260.t01 | Wine grape | cytosol | 67.62 | 62.61 |
| KRH68005 | Soybean | nucleus | 66.26 | 62.45 |
| GSMUA_Achr11P... | Banana | cytosol | 68.7 | 62.21 |
| KRG96264 | Soybean | nucleus | 66.12 | 62.01 |
| PGSC0003DMT400054943 | Potato | cytosol | 64.91 | 61.89 |
| EES05202 | Sorghum | plastid | 65.99 | 61.49 |
| Solyc01g007100.2.1 | Tomato | cytosol, plastid | 64.5 | 61.34 |
| EES10780 | Sorghum | cytosol | 63.82 | 59.77 |
| PGSC0003DMT400072563 | Potato | plastid | 64.09 | 59.12 |
| Solyc10g081900.1.1 | Tomato | plastid | 63.69 | 58.9 |
| Bra034821.1-P | Field mustard | cytosol, plastid | 63.96 | 58.42 |
| CDY08505 | Canola | cytosol, plastid | 63.96 | 58.34 |
| CDY01047 | Canola | cytosol, plastid | 63.14 | 57.82 |
| AT3G11670.1 | Thale cress | plastid | 63.01 | 57.55 |
| EER92641 | Sorghum | golgi | 34.55 | 53.68 |
| EER92494 | Sorghum | golgi | 33.47 | 53.23 |
| KRH49694 | Soybean | mitochondrion | 23.98 | 32.6 |
Protein Annotations
| Gene3D:3.40.50.2000 | MapMan:5.3.3 | UniProt:A0A1B6PQ40 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006629 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009536 | GO:GO:0009707 |
| GO:GO:0009719 | GO:GO:0009809 | GO:GO:0009867 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 |
| GO:GO:0016757 | GO:GO:0019375 | GO:GO:0019748 | GO:GO:0031408 | InterPro:Glyco_trans_1 | EnsemblPlants:KXG27790 |
| ProteinID:KXG27790 | ProteinID:KXG27790.1 | PFAM:PF00534 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF532 | EnsemblPlantsGene:SORBI_3005G045000 |
| SUPFAM:SSF53756 | UniParc:UPI0003C65FE7 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:4239821..4246866
Molecular Weight (calculated)
82749.6 Da
IEP (calculated)
7.127
GRAVY (calculated)
-0.482
Length
738 amino acids
Sequence
(BLAST)
(BLAST)
001: MASFGVDTRP AAAASGGGGG AGTTGEGALS FLSRGLREDL RLIRARAEEL ETFLSAPVPE PELFARLRRA YSSSASSART RLDLSAIGKA FEADAWSGAR
101: AARWRWEAEE AEEWEPVRMV KARLRELERR TQAQSPSDML HKLKLSLKSM TFAPETSEDV PPLDLGELLA YFVKQSVPLF DQLGIKRDVC DKLVESLCSK
201: RKDHPAYRFL SESEPSSLRN DNVGDELDLR IASVLQSTGH HYEGGFWSDG PKSDISGKRH VAIVTTASLP WMTGTAVNPL FRAAYLAKSS KQDVTLVVPW
301: LCKSDQELVY PNSMTFSSPQ EQETYMRNWL EERVGFKTDF KISFYPGKFQ KERRSIIPAG DTSQFIPSKE ADIAILEEPE HLNWYHHGKR WTDKFNHVVG
401: VVHTNYLEYI KREKNGAIQA FFVKHINNLV ARAYCHKILR LSGATQDLPK SMICNVHGVN PKFLEVGERI AAERESGQQS FSKGAYFLGK MVWAKGYREL
501: IDLFAKHKSD LEGFKLDIYG NGEDSHEVQS AARKLNLNLN FHKGRDHADD SLHGYKVFIN PSISDVLCTA TAEALAMGKF VVCADHPSND FFRSFPNCLT
601: YKTSEDFVAR VKEAMTRDPQ PLTPEQRYDL SWEAATQRFM EHSELDKVLN SDSSSECTSS VTTESGKSRD TRMRRSASAP NMSDVVDGGL AFVHYCFTGS
701: ELLRLSTGAV PGTRDYNKQH SLDLHLPPPQ VQNPVYGW
101: AARWRWEAEE AEEWEPVRMV KARLRELERR TQAQSPSDML HKLKLSLKSM TFAPETSEDV PPLDLGELLA YFVKQSVPLF DQLGIKRDVC DKLVESLCSK
201: RKDHPAYRFL SESEPSSLRN DNVGDELDLR IASVLQSTGH HYEGGFWSDG PKSDISGKRH VAIVTTASLP WMTGTAVNPL FRAAYLAKSS KQDVTLVVPW
301: LCKSDQELVY PNSMTFSSPQ EQETYMRNWL EERVGFKTDF KISFYPGKFQ KERRSIIPAG DTSQFIPSKE ADIAILEEPE HLNWYHHGKR WTDKFNHVVG
401: VVHTNYLEYI KREKNGAIQA FFVKHINNLV ARAYCHKILR LSGATQDLPK SMICNVHGVN PKFLEVGERI AAERESGQQS FSKGAYFLGK MVWAKGYREL
501: IDLFAKHKSD LEGFKLDIYG NGEDSHEVQS AARKLNLNLN FHKGRDHADD SLHGYKVFIN PSISDVLCTA TAEALAMGKF VVCADHPSND FFRSFPNCLT
601: YKTSEDFVAR VKEAMTRDPQ PLTPEQRYDL SWEAATQRFM EHSELDKVLN SDSSSECTSS VTTESGKSRD TRMRRSASAP NMSDVVDGGL AFVHYCFTGS
701: ELLRLSTGAV PGTRDYNKQH SLDLHLPPPQ VQNPVYGW
001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
Arabidopsis Description
DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.