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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • plastid 5
  • cytosol 2
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034821.1-P Field mustard cytosol, plastid 97.03 97.15
CDY01047 Canola cytosol, plastid 95.18 95.53
AT3G11670.1 Thale cress plastid 86.4 86.51
TraesCSU01G192800.1 Wheat mitochondrion 44.5 78.09
PGSC0003DMT400072559 Potato cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 7.66 75.61
KRH75753 Soybean mitochondrion 14.09 74.03
TraesCSU01G187100.2 Wheat cytosol 52.53 72.9
Solyc10g081870.1.1 Tomato cytosol, extracellular, peroxisome 10.38 72.41
TraesCSU01G186800.1 Wheat plasma membrane 52.41 70.2
KRH68005 Soybean nucleus 67.12 69.35
KRG96264 Soybean nucleus 66.87 68.74
VIT_08s0105g00260.t01 Wine grape cytosol 66.01 67.0
PGSC0003DMT400054943 Potato cytosol 63.91 66.8
Solyc01g007100.2.1 Tomato cytosol, plastid 63.41 66.11
PGSC0003DMT400072563 Potato plastid 64.52 65.25
GSMUA_Achr10P... Banana cytosol 63.66 65.11
Solyc10g081900.1.1 Tomato plastid 63.78 64.66
GSMUA_Achr11P... Banana cytosol 65.02 64.54
KXG27790 Sorghum nucleus 58.34 63.96
TraesCS4D01G112200.1 Wheat nucleus 56.98 63.41
TraesCS4A01G200600.1 Wheat nucleus 56.98 63.32
Os11t0158400-01 Rice cytosol 57.11 62.77
Zm00001d053149_P002 Maize plastid 58.1 61.68
HORVU4Hr1G020770.3 Barley nucleus 56.49 60.13
CDY07210 Canola mitochondrion 30.78 52.31
CDY51152 Canola mitochondrion, plastid 31.03 52.29
KRH49694 Soybean mitochondrion 21.63 32.23
Protein Annotations
EnsemblPlants:CDY08505EnsemblPlantsGene:GSBRNA2T00000279001Gene3D:3.40.50.2000InterPro:Glyco_trans_1PANTHER:PTHR12526PANTHER:PTHR12526:SF532
PFAM:PF00534ProteinID:CDY08505ProteinID:CDY08505.1SEG:segSUPFAM:SSF53756UniParc:UPI0004EEE5D2
UniProt:A0A078F235MapMan:5.3.3::::
Description
BnaA05g27410DBnaA05g27410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F235]
Coordinates
chrLK031986:-:460823..464567
Molecular Weight (calculated)
91679.8 Da
IEP (calculated)
7.465
GRAVY (calculated)
-0.482
Length
809 amino acids
Sequence
(BLAST)
001: MAKEIQSQSP PSSTANGITF SSSSSSSPSL SMMLSSTNAF SLLSKGWREV RDSADADLQL MRKRANSVKN LASTFDREIE NFLNNSAMSA FPVVSSSSSS
101: SAFGNEIGIM KKLEPKISEF RRVYSAPEIS RKVMERWGPA KAKLGMDLSA IKKAIVSEMD LDEREGVLEM RRRRDRDRFR EFYAEGEGEG SFGDWKPIRS
201: LKSRFKEFEK RSSLELLIGF KNSELVEKLK ASFQSLYKET DEAKDVPPLD VPELLASLVR QSEPFLDQIG VRKDLCDRVV ENLYKCKSQH LWRLPSSQAS
301: DLVENDNHVD DLDMRIASVL QSTGHHYDGG FWTDFLKPET PESKRHVAIV TTASLPWMTG TAVNPLFRAA YLAKSAKQSV TLVVPWLCES DQELVYPNNL
401: TFSSPEEQES YIRTWLEERI GFKADFKISF YPGKFSKERR SIFPAGDTSQ FIPSKDADIA ILEEPEHLNW YHHGKRWTDK FNHVVGIVHT NYLEYIKREK
501: HGAIQAFFVN HVNNWVTRAY CDKVLRLSGA TQDLPKSVIC NVHGVNPKFL MIGEKIAEER SRGEQAFSKG AYFLGKMVWA KGYRELIDLM AKHKSDLGGF
601: NLDVYGNGED AVEVQRAAQK LDLNLNFLKG RDHADDALHK YKVFINPSIS DVLCTATAEA LAMGKFVVCA DHPSNEFFRS FPNCLTYKTS EDFVNKVKEA
701: MSKEPLPLTP EQMYNLSWEA ATQRFMEYSD LDKILNDGDG GKRMRKSRSV PSFNEVIDGG LAFTHYVLTG NDFLRLCSGA TPKTKDYDMQ HCKDLKLVPP
801: QAHKPVYGW
Best Arabidopsis Sequence Match ( AT3G11670.1 )
(BLAST)
001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
Arabidopsis Description
DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.