Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G192800.1 | Wheat | mitochondrion | 76.32 | 100.0 |
| TraesCSU01G187100.2 | Wheat | cytosol | 93.71 | 97.08 |
| TraesCS4D01G112200.1 | Wheat | nucleus | 93.05 | 77.3 |
| TraesCS4A01G200600.1 | Wheat | nucleus | 92.38 | 76.65 |
| PGSC0003DMT400072559 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 10.26 | 75.61 |
| KRH75753 | Soybean | mitochondrion | 19.04 | 74.68 |
| HORVU4Hr1G020770.3 | Barley | nucleus | 91.06 | 72.37 |
| Solyc10g081870.1.1 | Tomato | cytosol, extracellular, peroxisome | 13.74 | 71.55 |
| Os11t0158400-01 | Rice | cytosol | 83.44 | 68.48 |
| KXG27790 | Sorghum | nucleus | 83.44 | 68.29 |
| Zm00001d053149_P002 | Maize | plastid | 80.96 | 64.17 |
| GSMUA_Achr10P... | Banana | cytosol | 74.67 | 57.02 |
| KRH68005 | Soybean | nucleus | 73.34 | 56.58 |
| KRG96264 | Soybean | nucleus | 73.51 | 56.42 |
| VIT_08s0105g00260.t01 | Wine grape | cytosol | 73.68 | 55.83 |
| GSMUA_Achr11P... | Banana | cytosol | 74.83 | 55.46 |
| PGSC0003DMT400054943 | Potato | cytosol | 70.53 | 55.04 |
| Solyc01g007100.2.1 | Tomato | cytosol, plastid | 70.03 | 54.51 |
| PGSC0003DMT400072563 | Potato | plastid | 69.87 | 52.75 |
| Solyc10g081900.1.1 | Tomato | plastid | 69.54 | 52.63 |
| CDY01047 | Canola | cytosol, plastid | 70.2 | 52.61 |
| Bra034821.1-P | Field mustard | cytosol, plastid | 70.36 | 52.6 |
| CDY08505 | Canola | cytosol, plastid | 70.2 | 52.41 |
| AT3G11670.1 | Thale cress | plastid | 69.04 | 51.61 |
| KRH49694 | Soybean | mitochondrion | 28.64 | 31.86 |
Protein Annotations
| EnsemblPlants:TraesCSU01G186800.1 | EnsemblPlantsGene:TraesCSU01G186800 | Gene3D:3.40.50.2000 | InterPro:Glyco_trans_1 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF532 |
| PFAM:PF00534 | SEG:seg | SUPFAM:SSF53756 | MapMan:5.3.3 | : | : |
Description
No Description!
Coordinates
chrUn:-:281537335..281539576
Molecular Weight (calculated)
68213.9 Da
IEP (calculated)
6.644
GRAVY (calculated)
-0.360
Length
604 amino acids
Sequence
(BLAST)
(BLAST)
001: MYILTHLHAC PGLATPFCFM HFLIYIDLVQ EVPPLDLNEL LAYFLKQSGP LFDQLGIKRD VCDKLVESLC SKRKDHFACD PLSTSESSSF RNDNTCDELD
101: LRIASVLQST GHHYEGGFWD DGQKYDVADK RHVAIVTTAS LPWMTGTAVN PLFRAAYLAK SSKQYVTLMV PWLCKSDQEL VYPNNMTFSS PEDQETYIRN
201: WLEERVGFKT DFRISFYPGK FQKERRSIIP AGDTSQFIPS KEADIAILEE PEHLNWYHHG KRWTDKFNHV VGVVHTNYLE YIKREKNGAI QAFFVKHINN
301: LVARAYCHKV LRLSGATQDL ARSMICNVHG VNPKFLEVGE RIAAERESGE QSMSKGAYFL GKMVWAKGYR ELIDLLAKHK TDLDGFKLDV YGNGEDSVEV
401: QSAAKKLDLN LNFHKGRDHA DDSLHGYKVF VNPSISDVLC TATAEALAMG KFVVCADHPS NDFFRSFPNC LTYTTSEDFV AKVKEAMTRD PQPLTPEQRY
501: NLSWEAATQR FMEHSELDKV LSSNGDSAST SGSSVDRRMK KSASLPNMSD IVDGGLAFAH YCFTGSELLR LSTGAVPGTL NYNKQHSVDM HLLPPQVQNP
601: VYGW
101: LRIASVLQST GHHYEGGFWD DGQKYDVADK RHVAIVTTAS LPWMTGTAVN PLFRAAYLAK SSKQYVTLMV PWLCKSDQEL VYPNNMTFSS PEDQETYIRN
201: WLEERVGFKT DFRISFYPGK FQKERRSIIP AGDTSQFIPS KEADIAILEE PEHLNWYHHG KRWTDKFNHV VGVVHTNYLE YIKREKNGAI QAFFVKHINN
301: LVARAYCHKV LRLSGATQDL ARSMICNVHG VNPKFLEVGE RIAAERESGE QSMSKGAYFL GKMVWAKGYR ELIDLLAKHK TDLDGFKLDV YGNGEDSVEV
401: QSAAKKLDLN LNFHKGRDHA DDSLHGYKVF VNPSISDVLC TATAEALAMG KFVVCADHPS NDFFRSFPNC LTYTTSEDFV AKVKEAMTRD PQPLTPEQRY
501: NLSWEAATQR FMEHSELDKV LSSNGDSAST SGSSVDRRMK KSASLPNMSD IVDGGLAFAH YCFTGSELLR LSTGAVPGTL NYNKQHSVDM HLLPPQVQNP
601: VYGW
001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
Arabidopsis Description
DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.