Factsheet for GSMUA_Achr10P09380_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G192800.1	Wheat	mitochondrion	47.66	81.78
TraesCSU01G187100.2	Wheat	cytosol	57.52	78.04
PGSC0003DMT400072559	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	7.84	75.61
TraesCSU01G186800.1	Wheat	plasma membrane	57.02	74.67
Solyc10g081870.1.1	Tomato	cytosol, extracellular, peroxisome	10.62	72.41
KRH75753	Soybean	mitochondrion	14.03	72.08
GSMUA_Achr11P...	Banana	cytosol	74.21	72.02
KRH68005	Soybean	nucleus	70.16	70.88
KRG96264	Soybean	nucleus	69.53	69.89
TraesCS4D01G112200.1	Wheat	nucleus	64.1	69.74
Os11t0158400-01	Rice	cytosol	64.85	69.7
KXG27790	Sorghum	nucleus	64.73	69.38
VIT_08s0105g00260.t01	Wine grape	cytosol	69.66	69.13
TraesCS4A01G200600.1	Wheat	nucleus	63.59	69.09
Zm00001d053149_P002	Maize	plastid	63.97	66.4
Solyc01g007100.2.1	Tomato	cytosol, plastid	64.98	66.24
PGSC0003DMT400054943	Potato	cytosol	64.35	65.76
HORVU4Hr1G020770.3	Barley	nucleus	63.08	65.66
PGSC0003DMT400072563	Potato	plastid	64.98	64.25
Solyc10g081900.1.1	Tomato	plastid	64.48	63.91
CDY08505	Canola	cytosol, plastid	65.11	63.66
CDY01047	Canola	cytosol, plastid	64.73	63.52
Bra034821.1-P	Field mustard	cytosol, plastid	64.85	63.49
AT3G11670.1	Thale cress	plastid	64.1	62.75
GSMUA_Achr10P...	Banana	cytosol	32.49	54.68
GSMUA_Achr9P03500_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	31.48	53.09
GSMUA_AchrUn_...	Banana	cytosol	31.35	52.54
GSMUA_Achr8P02460_001	Banana	cytosol, nucleus	1.9	51.72
GSMUA_Achr8P02450_001	Banana	cytosol	8.47	41.36
KRH49694	Soybean	mitochondrion	21.74	31.68
GSMUA_Achr10P...	Banana	cytosol	5.44	22.75

Protein Annotations

EnsemblPlants:GSMUA_Achr10P09380_001	EnsemblPlants:GSMUA_Achr10T09380_001	EnsemblPlantsGene:GSMUA_Achr10G09380_001	Gene3D:3.40.50.2000	InterPro:Glyco_trans_1	ncoils:Coil
PANTHER:PTHR12526	PANTHER:PTHR12526:SF532	PFAM:PF00534	SEG:seg	SUPFAM:SSF53756	UniParc:UPI000295AC65
UniProt:M0RGR4	MapMan:5.3.3	:	:	:	:

Description

Digalactosyldiacylglycerol synthase 1, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr10G09380_001]

Coordinates

chr10:+:19251166..19257271

Molecular Weight (calculated)

89260.1 Da

IEP (calculated)

7.580

GRAVY (calculated)

-0.399

Length

791 amino acids

Sequence
(BLAST)

001: MIDVGAESAA PGAGTAEKAL SFISRGWREV RDSAGADLRL MRARASSFKS LADREFENLL SSSAAVLSTP PRPSPPEVEF VKRIQPKLSE IRRAYSSPEF
101: SRRVLEKWSP KATIRIDLSA IRNAIVSEVD EVGAVLDVGK VKGQSWRMVR WKGVEEEEQG REWEPIRILK TGLKELERKS QSTSNELVEK LKSSLGSFVK
201: EPQESKVGCR LSFYFCYFIV KSSGYLLQEV PPLDLPELLA YFVKQSGPFF NQLGIRQDIC DKIVEALCSR RKDQFMYHSL PAKDTSLPGN ENSDELDLRI
301: ASVLESTGHH YEGGFWTDLV KHETTDQKRH VAIVTTASLP WMTGTAVNPL FRAAYLAKSA KQDVTLVVPW LCKSDQELVY PNNLSFCSPE EQEAYIRNWL
401: EERIGFKADF KISFYPGKFS KERRSIVPAG DTTQFIPSKE ADIAILEEPE HLNWYHHGKR WTDKFNYVVG VVHTNYLEYI KREKNGAIQA FFVKHINNWV
501: LRLSGATQEL PKSVICNVHG VNPKFLKVGE KIAAEREQGH QAFSKGAYFL GKMVWAKGYR ELIDLLAKHK NDLEGFNLDV YGNGEDSREV QSAARKLDLN
601: LNFFKGRDHA DDSLHGYKVF INPSVSDVLC TATAEALAMG KFVICADHPS NDFFRAFPNC LTYKTSEDFV AKVKEAMANE PQPLTPEQRY NLSWEAATQR
701: FMEYSELDKV LNKQESTSVN ADNLKISKSI SMPTLSSAVD GGLAFAHYCL TGNEILRLST GAIPGTRNYS KQHCMDLHLL PPQVQNPVYG W

Best Arabidopsis Sequence Match ( AT3G11670.1 )
(BLAST)

001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW

Arabidopsis Description

DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.