Factsheet for GSMUA_Achr10P00570_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P03500_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	83.62	83.8
GSMUA_Achr8P02460_001	Banana	cytosol, nucleus	4.89	79.31
GSMUA_Achr8P02450_001	Banana	cytosol	27.02	78.4
VIT_11s0016g00030.t01	Wine grape	cytosol	45.74	71.67
Os03t0268300-01	Rice	golgi	69.79	70.84
EER92494	Sorghum	golgi	68.51	69.4
GSMUA_AchrUn_...	Banana	cytosol	68.94	68.64
KRH15982	Soybean	cytosol	16.81	67.52
KRH00685	Soybean	cytosol	66.38	67.39
Zm00001d028571_P001	Maize	golgi	68.09	67.37
VIT_15s0046g03730.t01	Wine grape	cytosol	66.38	66.95
KRH40509	Soybean	cytosol	65.74	66.74
TraesCS4D01G211200.1	Wheat	mitochondrion	70.21	66.13
TraesCS4B01G210400.1	Wheat	mitochondrion	69.79	65.73
TraesCS4A01G093900.1	Wheat	mitochondrion	69.57	65.53
HORVU4Hr1G060440.2	Barley	mitochondrion	69.36	65.2
AT4G00550.1	Thale cress	cytosol	63.19	62.79
CDY51152	Canola	mitochondrion, plastid	63.62	62.29
CDY07210	Canola	mitochondrion	62.98	62.18
Bra037346.1-P	Field mustard	mitochondrion, plastid	63.19	61.75
PGSC0003DMT400026609	Potato	cytosol	59.36	60.52
PGSC0003DMT400000445	Potato	endoplasmic reticulum	59.15	60.17
Solyc10g017580.2.1	Tomato	cytosol	58.94	60.09
Solyc01g094170.2.1	Tomato	cytosol	52.13	58.19
VIT_07s0141g01080.t01	Wine grape	cytosol	11.91	50.0
GSMUA_Achr10P...	Banana	cytosol	54.68	32.49
GSMUA_Achr11P...	Banana	cytosol	54.26	31.29
GSMUA_Achr10P...	Banana	cytosol	7.23	17.99

Protein Annotations

EnsemblPlants:GSMUA_Achr10P00570_001	EnsemblPlants:GSMUA_Achr10T00570_001	EnsemblPlantsGene:GSMUA_Achr10G00570_001	Gene3D:3.40.50.2000	InterPro:Glyco_trans_1	ncoils:Coil
PANTHER:PTHR12526	PANTHER:PTHR12526:SF460	PFAM:PF00534	SUPFAM:SSF53756	UniParc:UPI00029597D9	UniProt:M0RE84
MapMan:5.3.3	:	:	:	:	:

Description

Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr10G00570_001]

Coordinates

chr10:+:1175243..1182487

Molecular Weight (calculated)

53886.6 Da

IEP (calculated)

6.827

GRAVY (calculated)

-0.246

Length

470 amino acids

Sequence
(BLAST)

001: MAQKQHIAIF TTASLPWMTG TAVNPLFRAA YLAKDSDWDV TLVIPWLSLK DQALVYPNKI TFSSLVEHEA YVHWWLKEKA DFISGFKITF YPGKFSKEKR
101: SILPVGDITE TIPDEVADIA ILEEPEHLTW YHHGRRWKTK FRKVIGVVHT NYLEYVKREK NGQIQAFLLK YVNSWVIQIY CHKVVRLSAA TQDLPRSIIC
201: NVHGVNPKFL EVGQMKHGLK VEGGQKAFSK GSYFIGKMVW SKAYTELLQL LSQHQNELSD LRVDLYGNGE DFDDIQKSFS KLTLGVRIYP GRDHVDSLFH
301: DYKVFINPST TDVVCTTTAE ALAMGKIVIC ANHPSNEFFR QFPNCHMYNT SNEFVQLTLR ALVEEPLPLT DDLRHALSWE AATERFVEAA ELNEVIREKT
401: LLSPKPSMQM PSDDWRKSVE EASAFLHNTI SGIEVARCAF GAIPETLQPD EQLCKELGLD FPEHKMFFRH

Best Arabidopsis Sequence Match ( AT4G00550.2 )
(BLAST)

001: MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD

Arabidopsis Description

DGD2Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W1S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.