Factsheet for VIT_07s0141g01080.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P02450_001	Banana	cytosol	52.68	36.42
VIT_15s0046g03730.t01	Wine grape	cytosol	82.14	19.74
KRH00685	Soybean	cytosol	61.61	14.9
KRH40509	Soybean	cytosol	58.93	14.25
Solyc01g094170.2.1	Tomato	cytosol	52.68	14.01
PGSC0003DMT400000445	Potato	endoplasmic reticulum	56.25	13.64
PGSC0003DMT400026609	Potato	cytosol	53.57	13.02
Solyc10g017580.2.1	Tomato	cytosol	52.68	12.8
AT4G00550.1	Thale cress	cytosol	53.57	12.69
GSMUA_AchrUn_...	Banana	cytosol	52.68	12.5
CDY07210	Canola	mitochondrion	52.68	12.39
CDY51152	Canola	mitochondrion, plastid	52.68	12.29
Bra037346.1-P	Field mustard	mitochondrion, plastid	51.79	12.06
GSMUA_Achr9P03500_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	50.0	11.94
GSMUA_Achr10P...	Banana	cytosol	50.0	11.91
EER92641	Sorghum	golgi	49.11	11.58
Zm00001d028211_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	49.11	11.58
Os03t0214400-01	Rice	plasma membrane	49.11	11.55
TraesCS4A01G093900.1	Wheat	mitochondrion	50.0	11.22
EER92494	Sorghum	golgi	46.43	11.21
TraesCS4B01G210400.1	Wheat	mitochondrion	49.11	11.02
TraesCS4D01G211200.1	Wheat	mitochondrion	49.11	11.02
Os03t0268300-01	Rice	golgi	45.54	11.02
Zm00001d028571_P001	Maize	golgi	46.43	10.95
HORVU4Hr1G060440.2	Barley	mitochondrion	48.21	10.8
HORVU4Hr1G067920.1	Barley	mitochondrion	44.64	10.5
TraesCS4B01G246700.1	Wheat	mitochondrion	44.64	10.5
TraesCS4D01G246000.1	Wheat	mitochondrion	44.64	10.5
TraesCS4A01G058200.1	Wheat	cytosol	44.64	9.78
VIT_08s0105g00260.t01	Wine grape	cytosol	35.71	5.02
KRH15982	Soybean	cytosol	0.0	0.0
VIT_11s0016g00030.t01	Wine grape	cytosol	0.0	0.0
GSMUA_Achr8P02460_001	Banana	cytosol, nucleus	0.0	0.0

Protein Annotations

ArrayExpress:VIT_07s0141g01080	EMBL:FN594965	EnsemblPlants:VIT_07s0141g01080.t01	EnsemblPlantsGene:VIT_07s0141g01080	PANTHER:PTHR12526	PANTHER:PTHR12526:SF460
ProteinID:CCB44721	ProteinID:CCB44721.1	UniParc:UPI00021097B8	UniProt:F6GXN5	MapMan:50.2.4	:

Description

No Description!

Coordinates

chr7:+:707348..707751

Molecular Weight (calculated)

12700.1 Da

IEP (calculated)

7.506

GRAVY (calculated)

-0.532

Length

112 amino acids

Sequence
(BLAST)

001: MGKIVVCANH PSNDFFKQFT NCRTYQDNNG FVKETLKTLS EEPAQLTYAQ MHELSWDAAT ERFLQAAGLD QAVESKPTKT PLKKFMSMRM NLRKNMDDAS
101: AYVHYVASGI EA

Best Arabidopsis Sequence Match ( AT4G00550.2 )
(BLAST)

001: MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD

Arabidopsis Description

DGD2Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W1S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.