Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07210 | Canola | mitochondrion | 90.7 | 90.13 |
| CDY51152 | Canola | mitochondrion, plastid | 90.06 | 88.75 |
| Bra037346.1-P | Field mustard | mitochondrion, plastid | 90.06 | 88.57 |
| VIT_11s0016g00030.t01 | Wine grape | cytosol | 46.09 | 72.67 |
| KRH40509 | Soybean | cytosol | 68.92 | 70.41 |
| KRH00685 | Soybean | cytosol | 68.71 | 70.19 |
| VIT_15s0046g03730.t01 | Wine grape | cytosol | 68.5 | 69.53 |
| GSMUA_Achr8P02460_001 | Banana | cytosol, nucleus | 4.23 | 68.97 |
| KRH15982 | Soybean | cytosol | 16.91 | 68.38 |
| PGSC0003DMT400026609 | Potato | cytosol | 64.06 | 65.73 |
| Solyc10g017580.2.1 | Tomato | cytosol | 63.85 | 65.51 |
| GSMUA_AchrUn_... | Banana | cytosol | 64.48 | 64.62 |
| PGSC0003DMT400000445 | Potato | endoplasmic reticulum | 63.0 | 64.5 |
| Os03t0268300-01 | Rice | golgi | 63.0 | 64.36 |
| Zm00001d028211_P002 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 63.85 | 63.58 |
| EER92641 | Sorghum | golgi | 63.64 | 63.37 |
| GSMUA_Achr10P... | Banana | cytosol | 62.79 | 63.19 |
| Os03t0214400-01 | Rice | plasma membrane | 63.42 | 63.03 |
| EER92494 | Sorghum | golgi | 61.73 | 62.93 |
| Solyc01g094170.2.1 | Tomato | cytosol | 55.18 | 62.0 |
| GSMUA_Achr9P03500_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 61.31 | 61.83 |
| Zm00001d028571_P001 | Maize | golgi | 61.95 | 61.68 |
| TraesCS4B01G246700.1 | Wheat | mitochondrion | 61.52 | 61.13 |
| TraesCS4D01G246000.1 | Wheat | mitochondrion | 61.52 | 61.13 |
| HORVU4Hr1G067920.1 | Barley | mitochondrion | 61.31 | 60.92 |
| TraesCS4A01G093900.1 | Wheat | mitochondrion | 63.42 | 60.12 |
| TraesCS4B01G210400.1 | Wheat | mitochondrion | 63.21 | 59.92 |
| TraesCS4D01G211200.1 | Wheat | mitochondrion | 63.21 | 59.92 |
| HORVU4Hr1G060440.2 | Barley | mitochondrion | 63.21 | 59.8 |
| TraesCS4A01G058200.1 | Wheat | cytosol | 61.73 | 57.14 |
| GSMUA_Achr8P02450_001 | Banana | cytosol | 18.82 | 54.94 |
| VIT_07s0141g01080.t01 | Wine grape | cytosol | 12.69 | 53.57 |
| AT3G11670.1 | Thale cress | plastid | 52.01 | 30.45 |
Protein Annotations
| PDB:2L7C | Gene3D:3.40.50.2000 | MapMan:5.3.3 | EntrezGene:827960 | UniProt:A0A178V709 | ProteinID:AAC13625.1 |
| ProteinID:AEE81898.1 | EMBL:AF421193 | EMBL:AF421194 | EMBL:AK220856 | EMBL:AK228220 | ProteinID:ANM67739.1 |
| ArrayExpress:AT4G00550 | EnsemblPlantsGene:AT4G00550 | RefSeq:AT4G00550 | TAIR:AT4G00550 | RefSeq:AT4G00550-TAIR-G | EnsemblPlants:AT4G00550.1 |
| TAIR:AT4G00550.1 | EMBL:BT010144 | ProteinID:CAB80864.1 | ncoils:Coil | Symbol:DGD2 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 |
| GO:GO:0006950 | GO:GO:0007154 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008194 | GO:GO:0009058 |
| GO:GO:0009247 | GO:GO:0009507 | GO:GO:0009527 | GO:GO:0009536 | GO:GO:0009605 | GO:GO:0009707 |
| GO:GO:0009987 | GO:GO:0009991 | GO:GO:0016020 | GO:GO:0016036 | GO:GO:0016740 | GO:GO:0016757 |
| GO:GO:0035250 | GO:GO:0046481 | InterPro:Glyco_trans_1 | EMBL:KJ138776 | RefSeq:NP_001329549.1 | RefSeq:NP_191964.2 |
| ProteinID:OAP00822.1 | PFAM:PF00534 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR12526 | PANTHER:PTHR12526:SF460 | UniProt:Q8W1S1 | SUPFAM:SSF53756 | UniParc:UPI00000A692A | SEG:seg |
Description
DGD2Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W1S1]
Coordinates
chr4:-:237955..240579
Molecular Weight (calculated)
53910.2 Da
IEP (calculated)
7.904
GRAVY (calculated)
-0.385
Length
473 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.