Factsheet for Bra037346.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51152	Canola	mitochondrion, plastid	98.34	98.54
AT4G00550.1	Thale cress	cytosol	88.57	90.06
VIT_11s0016g00030.t01	Wine grape	cytosol	44.91	72.0
KRH40509	Soybean	cytosol	67.98	70.63
KRH00685	Soybean	cytosol	67.78	70.41
KRH15982	Soybean	cytosol	16.84	69.23
GSMUA_Achr8P02460_001	Banana	cytosol, nucleus	4.16	68.97
VIT_15s0046g03730.t01	Wine grape	cytosol	66.53	68.67
Os03t0268300-01	Rice	golgi	63.83	66.31
GSMUA_AchrUn_...	Banana	cytosol	64.24	65.47
PGSC0003DMT400000445	Potato	endoplasmic reticulum	62.37	64.94
PGSC0003DMT400026609	Potato	cytosol	62.16	64.86
Solyc10g017580.2.1	Tomato	cytosol	61.95	64.64
Zm00001d028211_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	63.41	64.21
Os03t0214400-01	Rice	plasma membrane	63.2	63.87
EER92641	Sorghum	golgi	62.58	63.37
EER92494	Sorghum	golgi	61.12	63.36
GSMUA_Achr10P...	Banana	cytosol	61.75	63.19
Zm00001d028571_P001	Maize	golgi	61.33	62.11
GSMUA_Achr9P03500_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	60.5	62.05
Solyc01g094170.2.1	Tomato	cytosol	54.26	62.0
TraesCS4B01G246700.1	Wheat	mitochondrion	60.91	61.55
TraesCS4D01G246000.1	Wheat	mitochondrion	60.91	61.55
HORVU4Hr1G067920.1	Barley	mitochondrion	60.71	61.34
TraesCS4A01G093900.1	Wheat	mitochondrion	63.62	61.32
TraesCS4B01G210400.1	Wheat	mitochondrion	63.41	61.12
TraesCS4D01G211200.1	Wheat	mitochondrion	63.41	61.12
HORVU4Hr1G060440.2	Barley	mitochondrion	63.41	61.0
TraesCS4A01G058200.1	Wheat	cytosol	61.12	57.53
GSMUA_Achr8P02450_001	Banana	cytosol	17.67	52.47
VIT_07s0141g01080.t01	Wine grape	cytosol	12.06	51.79
Bra034821.1-P	Field mustard	cytosol, plastid	51.77	30.82

Protein Annotations

Gene3D:3.40.50.2000	MapMan:5.3.3	EnsemblPlantsGene:Bra037346	EnsemblPlants:Bra037346.1	EnsemblPlants:Bra037346.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006629	GO:GO:0006950	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0008194
GO:GO:0009058	GO:GO:0009247	GO:GO:0009536	GO:GO:0009605	GO:GO:0009707	GO:GO:0009987
GO:GO:0009991	GO:GO:0016020	GO:GO:0016036	GO:GO:0016740	UniProt:M4F8D4	PFAM:PF13692
PANTHER:PTHR12526	PANTHER:PTHR12526:SF460	SUPFAM:SSF53756	UniParc:UPI0002541AA4	SEG:seg	:

Description

AT4G00550 (E=5e-222) DGD2 | DGD2; UDP-galactosyltransferase/ UDP-glycosyltransferase/ digalactosyldiacylglycerol synthase/ transferase, transferring glycosyl groups

Coordinates

chrA09:+:950119..952640

Molecular Weight (calculated)

54912.8 Da

IEP (calculated)

9.107

GRAVY (calculated)

-0.420

Length

481 amino acids

Sequence
(BLAST)

001: MMMKQQQQQQ QQQKQHIAIF TTASLPWLTG TAVNPLFRAA YLAKDGQRRV TLVIPWLTLN HQLLVYPNNI TFASPSHQEA YVRRWLEDRV SFPLSFEIRF
101: YPGKFATDKR SILPVGDISD TIPDEEADIA VLEEPEHLTW FHHGKKWKTK FNYVIGVVHT NYLEYVKREK QGRLKAFLLK YLNSWVVGIY CHKVIRLSDA
201: TQEYPKSIVC NVHGVNPKFL EIGLKKLEQQ KLQEQPFTKG AYYIGKMVWS KGYKELLKLL KKHQKELAGL EVDLYGSGED SEEIKQAARK LDLTVNVYPG
301: RDHADPLFHN YKVFLNPSTT DVVCTTTAET LAMGKIVVCA DHTSNEFFKQ FPNCRVYDDG KGFVRATLKA LGEQPSQLTE QQRHELSWEA ATQRFIRVSD
401: LNRLARADSN LSKKSLFASS SISVGKNLED MSAYIHFLAS GFETSRTAFG AIPGSLQPDE ELCKDLGLTL KTPSRNSLKE D

Best Arabidopsis Sequence Match ( AT4G00550.2 )
(BLAST)

001: MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD

Arabidopsis Description

DGD2Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W1S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.