Factsheet for GSMUA_Achr8P02450_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0141g01080.t01	Wine grape	cytosol	36.42	52.68
GSMUA_Achr10P...	Banana	cytosol	78.4	27.02
GSMUA_Achr9P03500_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	77.16	26.65
Os03t0268300-01	Rice	golgi	64.81	22.68
EER92494	Sorghum	golgi	64.2	22.41
GSMUA_AchrUn_...	Banana	cytosol	63.58	21.82
Zm00001d028571_P001	Maize	golgi	63.58	21.68
TraesCS4A01G093900.1	Wheat	mitochondrion	66.05	21.44
TraesCS4D01G211200.1	Wheat	mitochondrion	66.05	21.44
HORVU4Hr1G060440.2	Barley	mitochondrion	66.05	21.4
TraesCS4B01G210400.1	Wheat	mitochondrion	65.43	21.24
Solyc01g094170.2.1	Tomato	cytosol	51.23	19.71
KRH00685	Soybean	cytosol	56.17	19.65
KRH40509	Soybean	cytosol	56.17	19.65
VIT_15s0046g03730.t01	Wine grape	cytosol	55.56	19.31
AT4G00550.1	Thale cress	cytosol	54.94	18.82
PGSC0003DMT400026609	Potato	cytosol	53.09	18.66
PGSC0003DMT400000445	Potato	endoplasmic reticulum	53.09	18.61
CDY07210	Canola	mitochondrion	53.7	18.28
Solyc10g017580.2.1	Tomato	cytosol	51.85	18.22
CDY51152	Canola	mitochondrion, plastid	53.7	18.12
Bra037346.1-P	Field mustard	mitochondrion, plastid	52.47	17.67
GSMUA_Achr10P...	Banana	cytosol	41.36	8.47
GSMUA_Achr11P...	Banana	cytosol	41.36	8.22
KRH15982	Soybean	cytosol	3.09	4.27
GSMUA_Achr10P...	Banana	cytosol	4.94	4.23
VIT_11s0016g00030.t01	Wine grape	cytosol	6.79	3.67
GSMUA_Achr8P02460_001	Banana	cytosol, nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr8P02450_001	EnsemblPlants:GSMUA_Achr8T02450_001	EnsemblPlantsGene:GSMUA_Achr8G02450_001	Gene3D:3.40.50.2000	ncoils:Coil	PANTHER:PTHR12526
PANTHER:PTHR12526:SF427	UniParc:UPI000295486D	UniProt:M0TLZ7	MapMan:5.3.3	:	:

Description

Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr8G02450_001]

Coordinates

chr8:-:1775445..1776541

Molecular Weight (calculated)

17935.0 Da

IEP (calculated)

4.666

GRAVY (calculated)

-0.239

Length

162 amino acids

Sequence
(BLAST)

001: MNLGVRIYPG RDHVDSLFHD YKVLINPSTT DVICTTTPEA LAMGKIVICA NHPSNEFFKQ FPNCHTYNTN NEFVKLTLAA LAEDPVPLTD DHRHALSLEA
101: ATERFVEAAD LNEATQEKAL ASPPPFMPIS SDDWSRSVEE ASAYLHNTVS GIEAARCLWC NS

Best Arabidopsis Sequence Match ( AT4G00550.1 )
(BLAST)

001: MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD

Arabidopsis Description

DGD2Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W1S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.