Factsheet for Solyc10g017580.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400026609	Potato	cytosol	98.26	98.26
Solyc01g094170.2.1	Tomato	cytosol	72.23	79.1
VIT_11s0016g00030.t01	Wine grape	cytosol	47.72	73.33
GSMUA_Achr8P02460_001	Banana	cytosol, nucleus	4.34	68.97
VIT_15s0046g03730.t01	Wine grape	cytosol	68.55	67.81
KRH00685	Soybean	cytosol	67.25	66.95
KRH40509	Soybean	cytosol	67.03	66.74
KRH15982	Soybean	cytosol	16.27	64.1
AT4G00550.1	Thale cress	cytosol	65.51	63.85
CDY07210	Canola	mitochondrion	64.86	62.82
CDY51152	Canola	mitochondrion, plastid	64.86	62.29
Bra037346.1-P	Field mustard	mitochondrion, plastid	64.64	61.95
GSMUA_AchrUn_...	Banana	cytosol	61.39	59.96
Os03t0268300-01	Rice	golgi	59.87	59.61
Zm00001d028211_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	60.95	59.16
GSMUA_Achr10P...	Banana	cytosol	60.09	58.94
EER92641	Sorghum	golgi	59.87	58.11
GSMUA_Achr9P03500_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	58.79	57.78
Os03t0214400-01	Rice	plasma membrane	59.65	57.77
EER92494	Sorghum	golgi	58.13	57.76
HORVU4Hr1G067920.1	Barley	mitochondrion	57.92	56.09
TraesCS4D01G246000.1	Wheat	mitochondrion	57.92	56.09
TraesCS4B01G246700.1	Wheat	mitochondrion	57.92	56.09
Zm00001d028571_P001	Maize	golgi	57.7	56.0
TraesCS4D01G211200.1	Wheat	mitochondrion	59.22	54.71
HORVU4Hr1G060440.2	Barley	mitochondrion	59.22	54.6
TraesCS4B01G210400.1	Wheat	mitochondrion	59.0	54.51
TraesCS4A01G093900.1	Wheat	mitochondrion	59.0	54.51
VIT_07s0141g01080.t01	Wine grape	cytosol	12.8	52.68
TraesCS4A01G058200.1	Wheat	cytosol	57.92	52.25
GSMUA_Achr8P02450_001	Banana	cytosol	18.22	51.85
Solyc10g081870.1.1	Tomato	cytosol, extracellular, peroxisome	11.5	45.69
Solyc01g007100.2.1	Tomato	cytosol, plastid	51.63	30.67
Solyc10g081900.1.1	Tomato	plastid	51.41	29.7

Protein Annotations

Gene3D:3.40.50.2000	MapMan:5.3.3	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009536	GO:GO:0009707	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740
GO:GO:0019375	GO:GO:0035250	UniProt:K4CYN6	PFAM:PF13692	PANTHER:PTHR12526	PANTHER:PTHR12526:SF460
SUPFAM:SSF53756	EnsemblPlantsGene:Solyc10g017580.2	EnsemblPlants:Solyc10g017580.2.1	UniParc:UPI000276C398	SEG:seg	:

Description

No Description!

Coordinates

chr10:+:5563204..5571131

Molecular Weight (calculated)

52350.8 Da

IEP (calculated)

8.618

GRAVY (calculated)

-0.325

Length

461 amino acids

Sequence
(BLAST)

001: MDKKHHIAIY TTASIPWLTG TSINPLFRAA YLAKDGEQKV TLVIPWLPLK DQEHVFPSGV KFNSHLEQEK CVRQWLEERT GFASNFSIRF YPGKFSLDKR
101: SILALGDITV IIPDDEADVA VLEEPEHLTW FHHGKRWKKK FRLVVGIVHT NYLEYVKRER NAVEAFFLKQ INSWVVDLYC HKVIRLSAAT QDLPRSLVCN
201: VHGVNPKFLQ IGMKAIEKQQ NDNQTFSKGV YYIGKMLWSK GYKELLRLLR DHQKELAGLE IDLYGSGEDS AQIEVAFKKL ELTVRVHPAR DHADPLFHNY
301: KVLLNPSTTD VVCTTTAEAL AMGKIVVCSN HPSNEFFMQF QNCRTYDDGK GFVKATLEAL SDEPSPLADK QRHELSWEAA TERFLKSAQL DVVPVKKTSK
401: TSSKSFLSTS FSLNRKLEDA SASVHFMGTG FLGSQPDEEQ CKELGLAIPS KKIGFSSGRW I

Best Arabidopsis Sequence Match ( AT4G00550.2 )
(BLAST)

001: MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD

Arabidopsis Description

DGD2Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W1S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.