Factsheet for Solyc10g081870.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol, peroxisome

Predictor Summary:

plastid 3
nucleus 1
peroxisome 1
mitochondrion 2
extracellular 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400072559	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	66.38	93.9
TraesCSU01G192800.1	Wheat	mitochondrion	63.79	16.05
TraesCSU01G187100.2	Wheat	cytosol	71.55	14.24
TraesCSU01G186800.1	Wheat	plasma membrane	71.55	13.74
KRH49694	Soybean	mitochondrion	60.34	12.89
Solyc10g017580.2.1	Tomato	cytosol	45.69	11.5
Solyc01g007100.2.1	Tomato	cytosol, plastid	75.86	11.34
TraesCS4D01G112200.1	Wheat	nucleus	70.69	11.28
Solyc10g081900.1.1	Tomato	plastid	77.59	11.28
TraesCS4A01G200600.1	Wheat	nucleus	69.83	11.13
VIT_08s0105g00260.t01	Wine grape	cytosol	73.28	10.66
HORVU4Hr1G020770.3	Barley	nucleus	69.83	10.66
GSMUA_Achr10P...	Banana	cytosol	72.41	10.62
KXG27790	Sorghum	nucleus	67.24	10.57
KRH68005	Soybean	nucleus	70.69	10.47
Os11t0158400-01	Rice	cytosol	66.38	10.46
GSMUA_Achr11P...	Banana	cytosol	73.28	10.43
CDY01047	Canola	cytosol, plastid	72.41	10.42
KRG96264	Soybean	nucleus	70.69	10.42
Bra034821.1-P	Field mustard	cytosol, plastid	72.41	10.4
CDY08505	Canola	cytosol, plastid	72.41	10.38
Zm00001d053149_P002	Maize	plastid	68.1	10.37
AT3G11670.1	Thale cress	plastid	70.69	10.15
Solyc01g094170.2.1	Tomato	cytosol	31.03	8.55
KRH75753	Soybean	mitochondrion	0.0	0.0

Protein Annotations

MapMan:50.2.4	GO:GO:0000033	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0005975	GO:GO:0006464
GO:GO:0006490	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016740	GO:GO:0019538	GO:GO:0033577	GO:GO:0097502	UniProt:K4D373
PANTHER:PTHR12526	PANTHER:PTHR12526:SF532	EnsemblPlantsGene:Solyc10g081870.1	EnsemblPlants:Solyc10g081870.1.1	UniParc:UPI0002769A89	:

Description

No Description!

Coordinates

chr10:-:62815859..62816302

Molecular Weight (calculated)

13287.9 Da

IEP (calculated)

8.238

GRAVY (calculated)

-0.271

Length

116 amino acids

Sequence
(BLAST)

001: MHVVTTASLP SITGTAVDIL FRAAHLARSE KQNAMLLVPW LCKSDQELIF PNHLSLSSPE DQDLYICNWL EERIGFKADF RISFYPGKFS KERRRITPSR
101: DTSQFIPSRD ADVAKF

Best Arabidopsis Sequence Match ( AT3G11670.2 )
(BLAST)

001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHK

Arabidopsis Description

DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.