CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
golgi 1
mitochondrion 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G192800.1	Wheat	mitochondrion	74.68	24.95
TraesCSU01G187100.2	Wheat	cytosol	74.68	19.73
TraesCSU01G186800.1	Wheat	plasma membrane	74.68	19.04
KRH40509	Soybean	cytosol	53.9	17.93
KRH00685	Soybean	cytosol	52.6	17.49
KRH68005	Soybean	nucleus	87.01	17.11
KRG96264	Soybean	nucleus	87.01	17.03
KXG27790	Sorghum	nucleus	75.97	15.85
TraesCS4D01G112200.1	Wheat	nucleus	74.68	15.82
Os11t0158400-01	Rice	cytosol	75.32	15.76
TraesCS4A01G200600.1	Wheat	nucleus	74.03	15.66
Zm00001d053149_P002	Maize	plastid	75.32	15.22
HORVU4Hr1G020770.3	Barley	nucleus	74.68	15.13
VIT_08s0105g00260.t01	Wine grape	cytosol	77.92	15.06
PGSC0003DMT400054943	Potato	cytosol	74.68	14.86
Solyc01g007100.2.1	Tomato	cytosol, plastid	74.03	14.69
PGSC0003DMT400072563	Potato	plastid	75.97	14.62
Solyc10g081900.1.1	Tomato	plastid	75.32	14.54
GSMUA_Achr11P...	Banana	cytosol	74.68	14.11
Bra034821.1-P	Field mustard	cytosol, plastid	74.03	14.11
CDY08505	Canola	cytosol, plastid	74.03	14.09
GSMUA_Achr10P...	Banana	cytosol	72.08	14.03
CDY01047	Canola	cytosol, plastid	72.73	13.9
AT3G11670.1	Thale cress	plastid	72.08	13.74
KRH15982	Soybean	cytosol	6.49	8.55
KRH49694	Soybean	mitochondrion	18.83	5.34
PGSC0003DMT400072559	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	0.0	0.0
Solyc10g081870.1.1	Tomato	cytosol, extracellular, peroxisome	0.0	0.0

Protein Annotations

EMBL:ACUP02000478	EnsemblPlants:KRH75753	EnsemblPlantsGene:GLYMA_01G106400	Gene3D:3.40.50.2000	PANTHER:PTHR12526	PANTHER:PTHR12526:SF532
ProteinID:KRH75753	ProteinID:KRH75753.1	SUPFAM:SSF53756	UniParc:UPI0002958BD3	UniProt:K7K326	MapMan:5.3.3

Description

hypothetical protein

Coordinates

chr1:-:36051359..36052527

Molecular Weight (calculated)

17288.8 Da

IEP (calculated)

8.825

GRAVY (calculated)

-0.349

Length

154 amino acids

Sequence
(BLAST)

001: MKHINNWVTR AYCNKVVRLS AATQDLPKSI ICNVHGVNPK LLKIGENIVA VRELGQKPFT KGAYFLGKMV WAKGYEELID LSAKHKADLD GFKLDVFQNG
101: EDANEIQSAA RRLDLNLNFQ KIRDHADDSL HGYKVFINPS ISDMLCTTTA EQGK

Best Arabidopsis Sequence Match ( AT3G11670.1 )
(BLAST)

001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW

Arabidopsis Description

DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.