Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 5
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g081900.1.1 | Tomato | plastid | 97.5 | 97.74 |
| PGSC0003DMT400054943 | Potato | cytosol | 79.38 | 82.04 |
| PGSC0003DMT400072559 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 8.38 | 81.71 |
| TraesCSU01G192800.1 | Wheat | mitochondrion | 44.38 | 77.01 |
| KRH75753 | Soybean | mitochondrion | 14.62 | 75.97 |
| VIT_08s0105g00260.t01 | Wine grape | cytosol | 72.5 | 72.77 |
| TraesCSU01G187100.2 | Wheat | cytosol | 52.88 | 72.56 |
| KRH68005 | Soybean | nucleus | 69.5 | 71.01 |
| KRG96264 | Soybean | nucleus | 69.62 | 70.78 |
| TraesCSU01G186800.1 | Wheat | plasma membrane | 52.75 | 69.87 |
| GSMUA_Achr11P... | Banana | cytosol | 66.5 | 65.28 |
| GSMUA_Achr10P... | Banana | cytosol | 64.25 | 64.98 |
| AT3G11670.1 | Thale cress | plastid | 65.62 | 64.98 |
| CDY08505 | Canola | cytosol, plastid | 65.25 | 64.52 |
| TraesCS4D01G112200.1 | Wheat | nucleus | 58.62 | 64.51 |
| Os11t0158400-01 | Rice | cytosol | 59.25 | 64.4 |
| CDY01047 | Canola | cytosol, plastid | 64.88 | 64.39 |
| Bra034821.1-P | Field mustard | cytosol, plastid | 65.0 | 64.36 |
| TraesCS4A01G200600.1 | Wheat | nucleus | 58.38 | 64.15 |
| KXG27790 | Sorghum | nucleus | 59.12 | 64.09 |
| HORVU4Hr1G020770.3 | Barley | nucleus | 58.25 | 61.32 |
| Zm00001d053149_P002 | Maize | plastid | 58.12 | 61.02 |
| PGSC0003DMT400000445 | Potato | endoplasmic reticulum | 30.25 | 52.38 |
| PGSC0003DMT400026609 | Potato | cytosol | 29.75 | 51.63 |
| KRH49694 | Soybean | mitochondrion | 22.38 | 32.97 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400072563 | EnsemblPlantsGene:PGSC0003DMG400028233 | EntrezGene:102585986 | Gene3D:3.40.50.2000 | InterPro:Glyco_trans_1 | ncoils:Coil |
| PANTHER:PTHR12526 | PANTHER:PTHR12526:SF532 | PFAM:PF00534 | PGSC:PGSC0003DMG400028233 | RefSeq:XP_006339167.1 | SEG:seg |
| SUPFAM:SSF53756 | UniParc:UPI0002955F0C | UniProt:M1CQJ7 | MapMan:5.3.3 | : | : |
Description
Galactolipid galactosyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400028233]
Coordinates
chr10:+:56137398..56144511
Molecular Weight (calculated)
90861.9 Da
IEP (calculated)
7.271
GRAVY (calculated)
-0.501
Length
800 amino acids
Sequence
(BLAST)
(BLAST)
001: MINFRPPETR TRPSVGSSSS SVVTAEKALS FISKGWQEVR SSADADLQLI KNRANKFKNL ADRELENFIN SASISPFAVP AITASTITAP AEIDFVKKLR
101: PKLSEIRRAY SSSEFKWPSQ GKLRIDLSAI KNAIVAEVEE EEEEEKERER EREIWRKWRC DRLKEERHFG EFDWEPIRTF KTRLKELEVE LKGSRSSPAE
201: IFEVIKNSEF VGKVKSSLKS ICKEPEETKG VPPLDVPELL AYLVRQSSPF LDQIGIRRDI SEKIVESLCS KGHSKLLLNS LPGGGSSLID GEIMNDELDL
301: RIASVLQSTG HCYDGGFWGD STKQNLEGDK RHVAIVTTAS LPWMTGTAVN PLFRAAYLAK SEKQNVTLLV PWLCKSDQEL VYPNQLTFSS PEAQELYIRN
401: WLEERIGFKA DFKISFYPGK FSKERRSILP AGDTSQFIPS RDADIAILEE PEHLNWYHHG KRWTNKFNHV VGIVHTNYLE YIKREKNGAL QAFFVKHINN
501: WVTRAYCDKV LRLSAATQDL PRSLVCNVHG VNPKFLKIGE KAAADRQSGQ KVFSKGAYFL GKMVWAKGYR ELIDLLSKHK TEFDGFNLDV FGNGEDAHEV
601: QSTAKRLNLN VNFMNGRDHA DDSLHGYKVF INPSISDVLC TATAEALAMG KFVVCADHPS NEFFQEFPNC LTYKTPEDFV AKVEKAMSSE PQPLTPEEQY
701: KLSWEAATQR FMKYSDLEKV LSDETSLDRR RRKGMGKSVS MPNLEEMVDG ALAFTHNCLT GNEFLRSCTG AIPRTRDYDK QHCNDLHLLP PQVENPIYGW
101: PKLSEIRRAY SSSEFKWPSQ GKLRIDLSAI KNAIVAEVEE EEEEEKERER EREIWRKWRC DRLKEERHFG EFDWEPIRTF KTRLKELEVE LKGSRSSPAE
201: IFEVIKNSEF VGKVKSSLKS ICKEPEETKG VPPLDVPELL AYLVRQSSPF LDQIGIRRDI SEKIVESLCS KGHSKLLLNS LPGGGSSLID GEIMNDELDL
301: RIASVLQSTG HCYDGGFWGD STKQNLEGDK RHVAIVTTAS LPWMTGTAVN PLFRAAYLAK SEKQNVTLLV PWLCKSDQEL VYPNQLTFSS PEAQELYIRN
401: WLEERIGFKA DFKISFYPGK FSKERRSILP AGDTSQFIPS RDADIAILEE PEHLNWYHHG KRWTNKFNHV VGIVHTNYLE YIKREKNGAL QAFFVKHINN
501: WVTRAYCDKV LRLSAATQDL PRSLVCNVHG VNPKFLKIGE KAAADRQSGQ KVFSKGAYFL GKMVWAKGYR ELIDLLSKHK TEFDGFNLDV FGNGEDAHEV
601: QSTAKRLNLN VNFMNGRDHA DDSLHGYKVF INPSISDVLC TATAEALAMG KFVVCADHPS NEFFQEFPNC LTYKTPEDFV AKVEKAMSSE PQPLTPEEQY
701: KLSWEAATQR FMKYSDLEKV LSDETSLDRR RRKGMGKSVS MPNLEEMVDG ALAFTHNCLT GNEFLRSCTG AIPRTRDYDK QHCNDLHLLP PQVENPIYGW
001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
Arabidopsis Description
DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.