Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g017580.2.1 | Tomato | cytosol | 98.26 | 98.26 |
| PGSC0003DMT400000445 | Potato | endoplasmic reticulum | 82.21 | 82.03 |
| VIT_11s0016g00030.t01 | Wine grape | cytosol | 47.94 | 73.67 |
| GSMUA_Achr8P02460_001 | Banana | cytosol, nucleus | 4.34 | 68.97 |
| VIT_15s0046g03730.t01 | Wine grape | cytosol | 69.2 | 68.45 |
| KRH00685 | Soybean | cytosol | 68.33 | 68.03 |
| KRH40509 | Soybean | cytosol | 68.11 | 67.82 |
| KRH15982 | Soybean | cytosol | 16.27 | 64.1 |
| AT4G00550.1 | Thale cress | cytosol | 65.73 | 64.06 |
| CDY07210 | Canola | mitochondrion | 65.08 | 63.03 |
| CDY51152 | Canola | mitochondrion, plastid | 65.08 | 62.5 |
| Bra037346.1-P | Field mustard | mitochondrion, plastid | 64.86 | 62.16 |
| GSMUA_AchrUn_... | Banana | cytosol | 62.04 | 60.59 |
| Os03t0268300-01 | Rice | golgi | 60.52 | 60.26 |
| Zm00001d028211_P002 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 61.39 | 59.58 |
| GSMUA_Achr10P... | Banana | cytosol | 60.52 | 59.36 |
| EER92641 | Sorghum | golgi | 60.52 | 58.74 |
| Os03t0214400-01 | Rice | plasma membrane | 60.52 | 58.61 |
| GSMUA_Achr9P03500_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 59.44 | 58.42 |
| EER92494 | Sorghum | golgi | 58.57 | 58.19 |
| HORVU4Hr1G067920.1 | Barley | mitochondrion | 58.79 | 56.93 |
| TraesCS4D01G246000.1 | Wheat | mitochondrion | 58.79 | 56.93 |
| TraesCS4B01G246700.1 | Wheat | mitochondrion | 58.79 | 56.93 |
| Zm00001d028571_P001 | Maize | golgi | 58.35 | 56.63 |
| HORVU4Hr1G060440.2 | Barley | mitochondrion | 59.65 | 55.0 |
| TraesCS4D01G211200.1 | Wheat | mitochondrion | 59.44 | 54.91 |
| TraesCS4B01G210400.1 | Wheat | mitochondrion | 59.22 | 54.71 |
| TraesCS4A01G093900.1 | Wheat | mitochondrion | 59.22 | 54.71 |
| VIT_07s0141g01080.t01 | Wine grape | cytosol | 13.02 | 53.57 |
| GSMUA_Achr8P02450_001 | Banana | cytosol | 18.66 | 53.09 |
| TraesCS4A01G058200.1 | Wheat | cytosol | 58.57 | 52.84 |
| PGSC0003DMT400072559 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 8.24 | 46.34 |
| PGSC0003DMT400054943 | Potato | cytosol | 51.41 | 30.62 |
| PGSC0003DMT400072563 | Potato | plastid | 51.63 | 29.75 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400026609 | EnsemblPlantsGene:PGSC0003DMG400010279 | EntrezGene:102578378 | Gene3D:3.40.50.2000 | ncoils:Coil | PANTHER:PTHR12526 |
| PANTHER:PTHR12526:SF460 | PFAM:PF13692 | PGSC:PGSC0003DMG400010279 | RefSeq:XP_006341724.1 | SEG:seg | SUPFAM:SSF53756 |
| UniParc:UPI000295C737 | UniProt:M1ANF5 | MapMan:5.3.3 | : | : | : |
Description
Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:PGSC_GENE;Acc:PGSC0003DMG400010279]
Coordinates
chr10:-:38731596..38739735
Molecular Weight (calculated)
52333.8 Da
IEP (calculated)
8.773
GRAVY (calculated)
-0.326
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKKHHIAIY TTASIPWLTG TSINPLFRAA YLAKDGEQKV TLVIPWLPLK DQEHVFPSGV KFNSHLEQEK CVRQWLEERT GFASNFSIRF YPGKFSVDKR
101: SILALGDITV IIPDDEADVA VLEEPEHLTW FHHGKRWKKK FRLVVGIVHT NYLEYVKRER NAVEAFFLKQ INSWVVDLYC HKVIRLSAAT QDLPRSLVCN
201: VHGVNPKFLQ IGMKTIEKQQ NDNQAFSKGV YYIGKMLWSK GYKELLRLLR DHQKELAGLE IDLYGSGEDS AQIEVAFKKL ELTVRVHPAR DHADPLFHNY
301: KVLLNPSTTD VVCTTTAEAL AMGKIVVCAN HPSNEFFMQF QNCRTYDDGK GFVKATLEAL ADEPAPLADK QRHELSWEAA TERFLKSAQL DVVPVKKTSK
401: TSSKSFLSTS FSLNRKLEDA SASVHFMGTG FLSSQPDEEQ CKELGLAIPS KKKGFSSGRW I
101: SILALGDITV IIPDDEADVA VLEEPEHLTW FHHGKRWKKK FRLVVGIVHT NYLEYVKRER NAVEAFFLKQ INSWVVDLYC HKVIRLSAAT QDLPRSLVCN
201: VHGVNPKFLQ IGMKTIEKQQ NDNQAFSKGV YYIGKMLWSK GYKELLRLLR DHQKELAGLE IDLYGSGEDS AQIEVAFKKL ELTVRVHPAR DHADPLFHNY
301: KVLLNPSTTD VVCTTTAEAL AMGKIVVCAN HPSNEFFMQF QNCRTYDDGK GFVKATLEAL ADEPAPLADK QRHELSWEAA TERFLKSAQL DVVPVKKTSK
401: TSSKSFLSTS FSLNRKLEDA SASVHFMGTG FLSSQPDEEQ CKELGLAIPS KKKGFSSGRW I
001: MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD
Arabidopsis Description
DGD2Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W1S1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.