Factsheet for TraesCS4B01G246700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G246000.1	Wheat	mitochondrion	98.11	98.11
HORVU4Hr1G067920.1	Barley	mitochondrion	97.9	97.9
TraesCS4A01G058200.1	Wheat	cytosol	98.32	91.59
EER92641	Sorghum	golgi	84.66	84.84
Zm00001d028211_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	84.03	84.21
Os03t0214400-01	Rice	plasma membrane	83.61	83.61
GSMUA_AchrUn_...	Banana	cytosol	67.86	68.43
VIT_11s0016g00030.t01	Wine grape	cytosol	42.86	68.0
KRH00685	Soybean	cytosol	62.82	64.58
KRH40509	Soybean	cytosol	62.82	64.58
VIT_15s0046g03730.t01	Wine grape	cytosol	61.97	63.3
CDY07210	Canola	mitochondrion	61.55	61.55
KRH15982	Soybean	cytosol	15.13	61.54
AT4G00550.1	Thale cress	cytosol	61.13	61.52
CDY51152	Canola	mitochondrion, plastid	61.97	61.46
Bra037346.1-P	Field mustard	mitochondrion, plastid	61.55	60.91
PGSC0003DMT400000445	Potato	endoplasmic reticulum	58.82	60.61
TraesCS4B01G210400.1	Wheat	mitochondrion	63.45	60.52
Solyc01g094170.2.1	Tomato	cytosol	52.31	59.14
PGSC0003DMT400026609	Potato	cytosol	56.93	58.79
Solyc10g017580.2.1	Tomato	cytosol	56.09	57.92
VIT_07s0141g01080.t01	Wine grape	cytosol	10.5	44.64
TraesCS2B01G314000.1	Wheat	mitochondrion	51.26	27.98

Protein Annotations

EnsemblPlants:TraesCS4B01G246700.1	EnsemblPlantsGene:TraesCS4B01G246700	Gene3D:3.40.50.2000	PANTHER:PTHR12526	PANTHER:PTHR12526:SF460	PFAM:PF13692
SUPFAM:SSF53756	MapMan:5.3.3	:	:	:	:

Description

No Description!

Coordinates

chr4B:+:510825549..510829211

Molecular Weight (calculated)

54614.6 Da

IEP (calculated)

8.578

GRAVY (calculated)

-0.378

Length

476 amino acids

Sequence
(BLAST)

001: MSARRHFAVF TTASLPWMTG TSINPLFRAA YLAKDGSRDV TLVIPWLSLR DQELVYPNKI VFDSPLEQEG FVRRWIEERV DFRPSFSIKF YPAKFSKEMR
101: SILPVGDITE CIPDEMADIA VLEEPEHLNW YHHGRRWKNK FRRVIGVIHT NYLAYVRREK NGQVIACCLR YANTWVTRIY CHKIIRLSGA TQDLPKSVVC
201: NIHGVNPKFL EVGRLKLKQL QNGEAAFTKG AYYIGKMVWS KGYRELLDLL SKYQSRLGDL EVDLYGSGED SDEIRESAER LSLAVNVHPG RDHADPLFHD
301: YKVFINPSTT DVVCTTSAEA LAMGKIVICA NHPSNEFFKQ FPNCRIYNND EEFVQLTLNA LAEQPTPLTD MQMYDLSWEA ATDRFMEAAE MNLPTAEPRI
401: QQASKTYFPT FLRTRKLKQS LEDASVYLHQ ALSGLEVTRC AFGAVPKTLQ PDEQLRKDLG LASPPKRKKQ KQKLMT

Best Arabidopsis Sequence Match ( AT4G00550.2 )
(BLAST)

001: MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD

Arabidopsis Description

DGD2Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W1S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.