Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400000445 | Potato | endoplasmic reticulum | 95.25 | 86.8 |
| Solyc10g017580.2.1 | Tomato | cytosol | 79.1 | 72.23 |
| VIT_11s0016g00030.t01 | Wine grape | cytosol | 45.84 | 64.33 |
| KRH15982 | Soybean | cytosol | 17.58 | 63.25 |
| VIT_15s0046g03730.t01 | Wine grape | cytosol | 67.46 | 60.94 |
| KRH00685 | Soybean | cytosol | 66.27 | 60.26 |
| KRH40509 | Soybean | cytosol | 65.8 | 59.83 |
| GSMUA_Achr8P02460_001 | Banana | cytosol, nucleus | 4.04 | 58.62 |
| CDY07210 | Canola | mitochondrion | 62.47 | 55.25 |
| AT4G00550.1 | Thale cress | cytosol | 62.0 | 55.18 |
| CDY51152 | Canola | mitochondrion, plastid | 62.47 | 54.79 |
| Bra037346.1-P | Field mustard | mitochondrion, plastid | 62.0 | 54.26 |
| GSMUA_AchrUn_... | Banana | cytosol | 60.33 | 53.81 |
| EER92641 | Sorghum | golgi | 60.33 | 53.47 |
| Zm00001d028211_P002 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 59.62 | 52.84 |
| Os03t0268300-01 | Rice | golgi | 57.96 | 52.7 |
| VIT_07s0141g01080.t01 | Wine grape | cytosol | 14.01 | 52.68 |
| Os03t0214400-01 | Rice | plasma membrane | 59.38 | 52.52 |
| TraesCS4B01G246700.1 | Wheat | mitochondrion | 59.14 | 52.31 |
| EER92494 | Sorghum | golgi | 57.48 | 52.16 |
| GSMUA_Achr10P... | Banana | cytosol | 58.19 | 52.13 |
| TraesCS4D01G246000.1 | Wheat | mitochondrion | 58.91 | 52.1 |
| HORVU4Hr1G067920.1 | Barley | mitochondrion | 58.43 | 51.68 |
| GSMUA_Achr8P02450_001 | Banana | cytosol | 19.71 | 51.23 |
| GSMUA_Achr9P03500_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 57.01 | 51.17 |
| Zm00001d028571_P001 | Maize | golgi | 57.24 | 50.74 |
| TraesCS4A01G093900.1 | Wheat | mitochondrion | 59.62 | 50.3 |
| TraesCS4B01G210400.1 | Wheat | mitochondrion | 58.91 | 49.7 |
| TraesCS4D01G211200.1 | Wheat | mitochondrion | 58.91 | 49.7 |
| HORVU4Hr1G060440.2 | Barley | mitochondrion | 58.91 | 49.6 |
| TraesCS4A01G058200.1 | Wheat | cytosol | 58.91 | 48.53 |
| Solyc10g081870.1.1 | Tomato | cytosol, extracellular, peroxisome | 8.55 | 31.03 |
| Solyc01g007100.2.1 | Tomato | cytosol, plastid | 51.54 | 27.96 |
| Solyc10g081900.1.1 | Tomato | plastid | 50.12 | 26.44 |
Protein Annotations
| Gene3D:3.40.50.2000 | MapMan:5.3.3 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009536 | GO:GO:0009707 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 | GO:GO:0019375 |
| GO:GO:0035250 | UniProt:K4AZF8 | PFAM:PF13692 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF460 | SUPFAM:SSF53756 |
| EnsemblPlantsGene:Solyc01g094170.2 | EnsemblPlants:Solyc01g094170.2.1 | UniParc:UPI00027687AA | : | : | : |
Description
No Description!
Coordinates
chr1:-:85741385..85746921
Molecular Weight (calculated)
47963.4 Da
IEP (calculated)
6.721
GRAVY (calculated)
-0.330
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MQVTLVVPWL PLVDQEHLFP NNITFDSHLE QEKHVRQWVE ERTGFESNFN IRFYPGKFSL DKRSILALGD ITVIIPDDEA DIAVLEEPEH LTWYHHGKRW
101: KEKFRLVVGI VHTNYWEIVR RERNIMVALL IKYINGWVID IYCHKVIRLS AATQDLPRSV VCNVHGVNPK FLQIGLKTRE KQQNDDQAFS KGVYYIGKKL
201: WNKGYKELLD LLRDHQKELP GFEIDLYGSG EDSAEIEMAA KKLELAVRVH PGRDHADPLF HDYRVLVNPS TTDVVCTTSA EALAMGKIVV CANHPSNEFF
301: MQFPNCLTYD DGEGFVKAII KALSDEPAPL TNAQRHALSW EAATQRFLKA AELPTNQPKT TTSEPFLSTS LNLTKKLENA SALVHFVGTG FLSSQPDEEQ
401: CKELGLKVPP KRTGFSSGKW I
101: KEKFRLVVGI VHTNYWEIVR RERNIMVALL IKYINGWVID IYCHKVIRLS AATQDLPRSV VCNVHGVNPK FLQIGLKTRE KQQNDDQAFS KGVYYIGKKL
201: WNKGYKELLD LLRDHQKELP GFEIDLYGSG EDSAEIEMAA KKLELAVRVH PGRDHADPLF HDYRVLVNPS TTDVVCTTSA EALAMGKIVV CANHPSNEFF
301: MQFPNCLTYD DGEGFVKAII KALSDEPAPL TNAQRHALSW EAATQRFLKA AELPTNQPKT TTSEPFLSTS LNLTKKLENA SALVHFVGTG FLSSQPDEEQ
401: CKELGLKVPP KRTGFSSGKW I
001: MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD
Arabidopsis Description
DGD2Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W1S1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.