Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 5
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400072563 | Potato | plastid | 97.74 | 97.5 |
| Solyc01g007100.2.1 | Tomato | cytosol, plastid | 76.69 | 78.87 |
| Solyc10g081870.1.1 | Tomato | cytosol, extracellular, peroxisome | 11.28 | 77.59 |
| TraesCSU01G192800.1 | Wheat | mitochondrion | 44.11 | 76.36 |
| KRH75753 | Soybean | mitochondrion | 14.54 | 75.32 |
| VIT_08s0105g00260.t01 | Wine grape | cytosol | 72.18 | 72.27 |
| TraesCSU01G187100.2 | Wheat | cytosol | 52.76 | 72.21 |
| KRH68005 | Soybean | nucleus | 69.05 | 70.37 |
| KRG96264 | Soybean | nucleus | 69.17 | 70.14 |
| TraesCSU01G186800.1 | Wheat | plasma membrane | 52.63 | 69.54 |
| GSMUA_Achr11P... | Banana | cytosol | 66.17 | 64.79 |
| GSMUA_Achr10P... | Banana | cytosol | 63.91 | 64.48 |
| AT3G11670.1 | Thale cress | plastid | 65.16 | 64.36 |
| TraesCS4D01G112200.1 | Wheat | nucleus | 58.52 | 64.24 |
| Os11t0158400-01 | Rice | cytosol | 59.02 | 63.99 |
| TraesCS4A01G200600.1 | Wheat | nucleus | 58.27 | 63.87 |
| CDY08505 | Canola | cytosol, plastid | 64.66 | 63.78 |
| Bra034821.1-P | Field mustard | cytosol, plastid | 64.54 | 63.74 |
| KXG27790 | Sorghum | nucleus | 58.9 | 63.69 |
| CDY01047 | Canola | cytosol, plastid | 64.29 | 63.65 |
| HORVU4Hr1G020770.3 | Barley | nucleus | 58.15 | 61.05 |
| Zm00001d053149_P002 | Maize | plastid | 57.89 | 60.63 |
| Solyc10g017580.2.1 | Tomato | cytosol | 29.7 | 51.41 |
| Solyc01g094170.2.1 | Tomato | cytosol | 26.44 | 50.12 |
| KRH49694 | Soybean | mitochondrion | 22.06 | 32.41 |
Protein Annotations
| Gene3D:3.40.50.2000 | MapMan:5.3.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009536 | GO:GO:0009707 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 |
| GO:GO:0019375 | GO:GO:0035250 | InterPro:Glyco_trans_1 | UniProt:K4D376 | PFAM:PF00534 | PANTHER:PTHR12526 |
| PANTHER:PTHR12526:SF532 | SUPFAM:SSF53756 | EnsemblPlantsGene:Solyc10g081900.1 | EnsemblPlants:Solyc10g081900.1.1 | UniParc:UPI0002769C05 | SEG:seg |
Description
No Description!
Coordinates
chr10:-:62839093..62845361
Molecular Weight (calculated)
90401.5 Da
IEP (calculated)
7.853
GRAVY (calculated)
-0.476
Length
798 amino acids
Sequence
(BLAST)
(BLAST)
001: MINFRPPETR TRPSVGSSSS SVVTAEKALS FISKGWQEVR SSADADLQLI KNRANKFKNL ADRELENFIN SASISPFAVP AITASTTTAP AEIDFVKKLR
101: PKLSEIRRAY SSSEFKWPSQ GKLRIDLSAI KNAIVAEVEE EEEQEKERER EIWRKWRCDR LKEERHFGEF DWEPIKAFKT RLKELEVELK GSSSSPAEIF
201: EVIKNSEFMG KVKSSLKSIC KEPEDAKGVP PLDVPELLAY LVRQSSPFLD QLGIRRDISE KIVESLCSKG HSKLLLNSLP GGGSSLIDGE IMNDELDLRI
301: ASVLQSTGHC YDGGFWGDST KQNLEGDKRH VAIVTTASLP WMTGTAVNPL FRAAYLAKSE KQNVTLLVPW LCKSDQELVY PNQLTFSSPE AQELYIRNWL
401: KERIGFKADF KISFYPGKFS KERRSILPAG DTSQFIPSRD ADIAILEEPE HLNWYHHGKR WTDKFNHVVG IVHTNYLEYI KREKNGALQA FFVKHINNWV
501: TRAYCDKVLR LSAATQDLPR SLVCNVHGVN PKFLKIGEKA AADRQSGQKV FSKGAYFLGK MVWAKGYREL IDLLSKHKTE FDGFHLDVFG NGEDAHEVQC
601: TAKRLNLNVN FMKGRDHAHD SLHGYKVFIN PSISDVLCTA TAEALAMGKF VVCADHPSNE FFQAFANCLT YKTPEDFVAK VEKAMSSEPQ PLSPEEQYKL
701: SWEAATQRFM KYSDLEKVLS DETSLDRRRR KGMGKSVSMP NLEEMVDGAL AFTHNCLTGN EFLRSCTGAI PRTRDYDKQH CNDLHLLPPQ VENPIYGW
101: PKLSEIRRAY SSSEFKWPSQ GKLRIDLSAI KNAIVAEVEE EEEQEKERER EIWRKWRCDR LKEERHFGEF DWEPIKAFKT RLKELEVELK GSSSSPAEIF
201: EVIKNSEFMG KVKSSLKSIC KEPEDAKGVP PLDVPELLAY LVRQSSPFLD QLGIRRDISE KIVESLCSKG HSKLLLNSLP GGGSSLIDGE IMNDELDLRI
301: ASVLQSTGHC YDGGFWGDST KQNLEGDKRH VAIVTTASLP WMTGTAVNPL FRAAYLAKSE KQNVTLLVPW LCKSDQELVY PNQLTFSSPE AQELYIRNWL
401: KERIGFKADF KISFYPGKFS KERRSILPAG DTSQFIPSRD ADIAILEEPE HLNWYHHGKR WTDKFNHVVG IVHTNYLEYI KREKNGALQA FFVKHINNWV
501: TRAYCDKVLR LSAATQDLPR SLVCNVHGVN PKFLKIGEKA AADRQSGQKV FSKGAYFLGK MVWAKGYREL IDLLSKHKTE FDGFHLDVFG NGEDAHEVQC
601: TAKRLNLNVN FMKGRDHAHD SLHGYKVFIN PSISDVLCTA TAEALAMGKF VVCADHPSNE FFQAFANCLT YKTPEDFVAK VEKAMSSEPQ PLSPEEQYKL
701: SWEAATQRFM KYSDLEKVLS DETSLDRRRR KGMGKSVSMP NLEEMVDGAL AFTHNCLTGN EFLRSCTGAI PRTRDYDKQH CNDLHLLPPQ VENPIYGW
001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
Arabidopsis Description
DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.