Factsheet for GSMUA_Achr11P12060_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G192800.1	Wheat	mitochondrion	46.99	83.08
PGSC0003DMT400072559	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	7.85	78.05
TraesCSU01G187100.2	Wheat	cytosol	55.21	77.19
TraesCSU01G186800.1	Wheat	plasma membrane	55.46	74.83
KRH75753	Soybean	mitochondrion	14.11	74.68
GSMUA_Achr10P...	Banana	cytosol	72.02	74.21
Solyc10g081870.1.1	Tomato	cytosol, extracellular, peroxisome	10.43	73.28
KRH68005	Soybean	nucleus	68.1	70.88
KRG96264	Soybean	nucleus	67.36	69.76
VIT_08s0105g00260.t01	Wine grape	cytosol	67.48	69.01
TraesCS4D01G112200.1	Wheat	nucleus	61.35	68.78
Os11t0158400-01	Rice	cytosol	62.09	68.75
KXG27790	Sorghum	nucleus	62.21	68.7
TraesCS4A01G200600.1	Wheat	nucleus	61.1	68.41
PGSC0003DMT400054943	Potato	cytosol	63.44	66.8
PGSC0003DMT400072563	Potato	plastid	65.28	66.5
Solyc01g007100.2.1	Tomato	cytosol, plastid	63.31	66.49
Solyc10g081900.1.1	Tomato	plastid	64.79	66.17
Zm00001d053149_P002	Maize	plastid	61.72	66.01
Bra034821.1-P	Field mustard	cytosol, plastid	64.79	65.35
CDY08505	Canola	cytosol, plastid	64.54	65.02
CDY01047	Canola	cytosol, plastid	64.29	65.01
HORVU4Hr1G020770.3	Barley	nucleus	60.61	65.0
AT3G11670.1	Thale cress	plastid	64.42	64.98
GSMUA_Achr10P...	Banana	cytosol	31.29	54.26
GSMUA_Achr9P03500_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	30.92	53.73
GSMUA_AchrUn_...	Banana	cytosol	31.04	53.6
GSMUA_Achr8P02460_001	Banana	cytosol, nucleus	1.72	48.28
GSMUA_Achr8P02450_001	Banana	cytosol	8.22	41.36
KRH49694	Soybean	mitochondrion	22.33	33.52
GSMUA_Achr10P...	Banana	cytosol	5.28	22.75

Protein Annotations

EnsemblPlants:GSMUA_Achr11P12060_001	EnsemblPlants:GSMUA_Achr11T12060_001	EnsemblPlantsGene:GSMUA_Achr11G12060_001	Gene3D:3.40.50.2000	InterPro:Glyco_trans_1	PANTHER:PTHR12526
PANTHER:PTHR12526:SF532	PFAM:PF00534	SUPFAM:SSF53756	UniParc:UPI0002961A52	UniProt:M0RRI6	MapMan:5.3.3

Description

Digalactosyldiacylglycerol synthase 1, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr11G12060_001]

Coordinates

chr11:+:10923828..10934617

Molecular Weight (calculated)

92480.8 Da

IEP (calculated)

7.472

GRAVY (calculated)

-0.349

Length

815 amino acids

Sequence
(BLAST)

001: MLNLGAERPP PQLATGTAEK ALSFLSKGWR EVRDSADADL QLMRKRANSF KNLADRELEH FLNSAAIPPS GAALPSPSIA EFELVKRIQP KLSAIRRAYS
101: SPEFGRRVLE KWSPKATIRL DLSAIKNAIV SEVDEVGAAL DLSWDEDQSK EKIMWEEGRA EIVEEGKGWE PIRILKTRLK EFERKSQSTE IFGTFKSSEF
201: IEKVKLSLSK MFIFLILDSG LYMASLTMHV CHLMLLTHGL DVPPLDIPEL LAHIVKQSWP LFDHLGIRRD IYVKMVETLC SRHRDQVMYH HSLYAKEESL
301: YENEKISDEL DLRIASVLHN TGHHYEGGFW TSFVKNESAD RKHHVAIVTT ASLPWMTGTA VNPLFRAAYL AKSAKQAVTL VVPWLCKSDQ ELVYPNNLSF
401: SSPEAQEAYI RNWLEERVGF KADFKISFYP GKFSKERRSI IPAGDTSQFI PSKEADIAIL EEPEHLNWYH HGKRWTDKFN HVVGIVHTNY LEYIKREKNG
501: AIQAFLVKHI NNMVTRAYCH KVLRLSAATQ DLPKSVICNV HGVNPKFLMI GEKVAAERVH GQQAFSKGAY FLGKMVWAKG YRELIDLLAK HKSDLEGFKL
601: DVYGNGEDSQ EVQSVAKKLD LNLNFLRGRD HADDSLHEYK VFVNPSVSDV LCTATAEALA MGKFVICADH PSNEFFRAFP NCLTYKTSED FVSRVKEAMA
701: SDPQPLTPEQ RHNLSWEAAT QRFMEYSELD KILNNEEPMN GDKAIYGRKM KKSISMPSLS DVMDGGLAFA HYCFTGNEIL RLTTGAIPGS RDYGKQHSVD
801: LRLLPPQVQN PVYGW

Best Arabidopsis Sequence Match ( AT3G11670.1 )
(BLAST)

001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW

Arabidopsis Description

DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.