Factsheet for GSMUA_Achr8P02460_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g00030.t01	Wine grape	cytosol	72.41	7.0
GSMUA_Achr9P03500_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	82.76	5.12
KRH40509	Soybean	cytosol	79.31	4.97
GSMUA_Achr10P...	Banana	cytosol	79.31	4.89
KRH00685	Soybean	cytosol	75.86	4.75
Solyc10g017580.2.1	Tomato	cytosol	68.97	4.34
PGSC0003DMT400026609	Potato	cytosol	68.97	4.34
Os03t0268300-01	Rice	golgi	68.97	4.32
VIT_15s0046g03730.t01	Wine grape	cytosol	68.97	4.29
AT4G00550.1	Thale cress	cytosol	68.97	4.23
Zm00001d028571_P001	Maize	golgi	68.97	4.21
CDY07210	Canola	mitochondrion	68.97	4.2
CDY51152	Canola	mitochondrion, plastid	68.97	4.17
Bra037346.1-P	Field mustard	mitochondrion, plastid	68.97	4.16
EER92494	Sorghum	golgi	65.52	4.09
Solyc01g094170.2.1	Tomato	cytosol	58.62	4.04
GSMUA_AchrUn_...	Banana	cytosol	65.52	4.03
TraesCS4B01G210400.1	Wheat	mitochondrion	68.97	4.01
TraesCS4A01G093900.1	Wheat	mitochondrion	65.52	3.81
TraesCS4D01G211200.1	Wheat	mitochondrion	65.52	3.81
HORVU4Hr1G060440.2	Barley	mitochondrion	65.52	3.8
PGSC0003DMT400000445	Potato	endoplasmic reticulum	58.62	3.68
GSMUA_Achr10P...	Banana	cytosol	51.72	1.9
GSMUA_Achr11P...	Banana	cytosol	48.28	1.72
GSMUA_Achr10P...	Banana	cytosol	6.9	1.06
KRH15982	Soybean	cytosol	3.45	0.85
GSMUA_Achr8P02450_001	Banana	cytosol	0.0	0.0
VIT_07s0141g01080.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr8P02460_001	EnsemblPlants:GSMUA_Achr8T02460_001	EnsemblPlantsGene:GSMUA_Achr8G02460_001	ncoils:Coil	UniParc:UPI000294D8B5	UniProt:M0TLZ8
MapMan:35.2	:	:	:	:	:

Description

Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr8G02460_001]

Coordinates

chr8:-:1776584..1776673

Molecular Weight (calculated)

3507.2 Da

IEP (calculated)

4.539

GRAVY (calculated)

-0.421

Length

29 amino acids

Sequence
(BLAST)

1: MIWSKGYREL LQLLSDHQNE LSNLQVDLY

Best Arabidopsis Sequence Match ( AT4G00550.1 )
(BLAST)

001: MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD

Arabidopsis Description

DGD2Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W1S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.