Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 2
- mitochondrion 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028571_P001 | Maize | golgi | 94.18 | 92.0 |
| Os03t0268300-01 | Rice | golgi | 87.07 | 87.26 |
| TraesCS4D01G211200.1 | Wheat | mitochondrion | 86.64 | 80.56 |
| TraesCS4B01G210400.1 | Wheat | mitochondrion | 86.42 | 80.36 |
| HORVU4Hr1G060440.2 | Barley | mitochondrion | 86.21 | 80.0 |
| TraesCS4A01G093900.1 | Wheat | mitochondrion | 85.78 | 79.76 |
| VIT_11s0016g00030.t01 | Wine grape | cytosol | 45.04 | 69.67 |
| GSMUA_Achr10P... | Banana | cytosol | 69.4 | 68.51 |
| GSMUA_Achr9P03500_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 67.03 | 66.31 |
| VIT_15s0046g03730.t01 | Wine grape | cytosol | 65.95 | 65.67 |
| GSMUA_Achr8P02460_001 | Banana | cytosol, nucleus | 4.09 | 65.52 |
| EER92641 | Sorghum | golgi | 65.95 | 64.42 |
| GSMUA_Achr8P02450_001 | Banana | cytosol | 22.41 | 64.2 |
| KRH40509 | Soybean | cytosol | 64.01 | 64.15 |
| KRH00685 | Soybean | cytosol | 63.58 | 63.71 |
| KRH15982 | Soybean | cytosol | 15.73 | 62.39 |
| AT4G00550.1 | Thale cress | cytosol | 62.93 | 61.73 |
| CDY51152 | Canola | mitochondrion, plastid | 63.58 | 61.46 |
| Bra037346.1-P | Field mustard | mitochondrion, plastid | 63.36 | 61.12 |
| CDY07210 | Canola | mitochondrion | 62.5 | 60.92 |
| PGSC0003DMT400000445 | Potato | endoplasmic reticulum | 59.27 | 59.52 |
| PGSC0003DMT400026609 | Potato | cytosol | 58.19 | 58.57 |
| Solyc10g017580.2.1 | Tomato | cytosol | 57.76 | 58.13 |
| Solyc01g094170.2.1 | Tomato | cytosol | 52.16 | 57.48 |
| VIT_07s0141g01080.t01 | Wine grape | cytosol | 11.21 | 46.43 |
| KXG27790 | Sorghum | nucleus | 53.23 | 33.47 |
| EES10780 | Sorghum | cytosol | 54.74 | 32.23 |
| EES05202 | Sorghum | plastid | 54.74 | 32.07 |
Protein Annotations
| Gene3D:3.40.50.2000 | MapMan:5.3.3 | EntrezGene:8084949 | UniProt:C5WQ30 | EnsemblPlants:EER92494 | ProteinID:EER92494 |
| ProteinID:EER92494.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009536 |
| GO:GO:0009707 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 | GO:GO:0019375 | GO:GO:0035250 |
| InterPro:Glyco_trans_1 | ProteinID:KXG39713.1 | PFAM:PF00534 | PFscan:PS51257 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF427 |
| EnsemblPlantsGene:SORBI_3001G424600 | SUPFAM:SSF53756 | UniParc:UPI0001A82CF2 | RefSeq:XP_002465496.1 | : | : |
Description
hypothetical protein
Coordinates
chr1:+:70475265..70478917
Molecular Weight (calculated)
52950.5 Da
IEP (calculated)
7.465
GRAVY (calculated)
-0.357
Length
464 amino acids
Sequence
(BLAST)
(BLAST)
001: MARKQQHIAI FTTACLPWMT GTAVNPLFRA AYLAKAGNWE VTLVVPWLSK GDQELVYPNK MKFSSPAEQE NYVRQWLEER TGPLPKFDIK FYPGKFSTEK
101: RSILPVGDIS QTISDDKADI AVLEEPEHLT WYHHGRRWKS KFPKVIGVVH TNYLEYVKRE KNGYISAFIL KHINSWVTDI YCHKVIRLSA ATQDVPRSVI
201: CNVHGVNPKF IEIGKLKHQE LCQREQAFFK GAYYIGKMVW SKGYTELLHL LHKHQMELSV LKMELYGSGE DADEVKASAE RLSLDIRVYP GRDHGDSIFH
301: DYKVFINPST TDVVCTTTAE ALAMGKIVIC ANHPSNDFFK RFPNCHMYST EKEFVTLTMK ALGEEPIPLS DDLRHELSWE AATERFVRVA DIAPTMPVGQ
401: QPPASPHFMR ISPDNLQKNM EEASAFFHNT ISGIETARCV FGAIPNTLQP DEQQCKELGW KLQG
101: RSILPVGDIS QTISDDKADI AVLEEPEHLT WYHHGRRWKS KFPKVIGVVH TNYLEYVKRE KNGYISAFIL KHINSWVTDI YCHKVIRLSA ATQDVPRSVI
201: CNVHGVNPKF IEIGKLKHQE LCQREQAFFK GAYYIGKMVW SKGYTELLHL LHKHQMELSV LKMELYGSGE DADEVKASAE RLSLDIRVYP GRDHGDSIFH
301: DYKVFINPST TDVVCTTTAE ALAMGKIVIC ANHPSNDFFK RFPNCHMYST EKEFVTLTMK ALGEEPIPLS DDLRHELSWE AATERFVRVA DIAPTMPVGQ
401: QPPASPHFMR ISPDNLQKNM EEASAFFHNT ISGIETARCV FGAIPNTLQP DEQQCKELGW KLQG
001: MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD
Arabidopsis Description
DGD2Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W1S1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.